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解淀粉芽孢杆菌 S3-1 的全基因组序列,一种具有抑制植物病原菌和促进植物生长能力的潜在生物农药。

Complete genome sequence of Bacillus velezensis S3-1, a potential biological pesticide with plant pathogen inhibiting and plant promoting capabilities.

机构信息

Development Center of Plant Germplasm, College of Life and Environment Sciences, Shanghai Normal University, Shanghai, 200234, China.

Development Center of Plant Germplasm, College of Life and Environment Sciences, Shanghai Normal University, Shanghai, 200234, China; Department of Microbiology and Microbial Engineering, School of Life Sciences, Fudan University, 2005 Song Hu Road, Shanghai, 200438, China.

出版信息

J Biotechnol. 2017 Oct 10;259:199-203. doi: 10.1016/j.jbiotec.2017.07.011. Epub 2017 Jul 12.

Abstract

Antagonistic soil microorganisms, which are non-toxic, harmless non-pollutants, can effectively reduce the density of pathogenic species by some ways. Bacillus velezensis strain S3-1 was isolated from the rhizosphere soil of cucumber, and was shown to inhibit plant pathogens, promote plant growth and efficiently colonize rhizosphere soils. The strain produced 13 kinds of lipopeptide antibiotics, belonging to the surfactin, iturin and fengycin families. Here, we presented the complete genome sequence of S3-1. The genome consists of one chromosome without plasmids and also contains the biosynthetic gene cluster that encodes difficidin, macrolactin, surfactin and fengycin. The genome contains 86 tRNA genes, 27 rRNA genes and 57 antibiotic-related genes. The complete genome sequence of B. velezensis S3-1 provides useful information to further detect the molecular mechanisms behind antifungal actions, and will facilitate its potential as a biological pesticide in the agricultural industry.

摘要

拮抗土壤微生物是无毒、无害、无污染的,可通过多种方式有效降低病原物种密度。从黄瓜根际土壤中分离到的枯草芽孢杆菌 S3-1 菌株,具有抑制植物病原菌、促进植物生长和有效定殖根际土壤的作用。该菌株产生了 13 种脂肽类抗生素,属于表面活性素、伊枯草菌素和芬枯草菌素家族。本文介绍了 S3-1 的全基因组序列。该基因组由一个不含质粒的染色体组成,还包含编码 difficidin、大环内酯、表面活性素和芬枯草菌素的生物合成基因簇。基因组包含 86 个 tRNA 基因、27 个 rRNA 基因和 57 个抗生素相关基因。B. velezensis S3-1 的全基因组序列为进一步检测抗真菌作用背后的分子机制提供了有用信息,并将有助于其在农业领域作为生物农药的应用。

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