Yang Caiyun, Wang Qi, Simon Paulina N, Liu Jinyu, Liu Lincong, Dai Xianzhu, Zhang Xiaohui, Kuang Jialiang, Igarashi Yasuo, Pan Xuejun, Luo Feng
Research Center of Bioenergy and Bioremediation, Southwest UniversityChongqing, China.
State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Plant Resources and Conservation of Guangdong Higher Education Institutes, College of Ecology and Evolution, Sun Yat-sen UniversityGuangzhou, China.
Front Microbiol. 2017 Jun 30;8:1202. doi: 10.3389/fmicb.2017.01202. eCollection 2017.
Particle-associated bacteria (PAB) and free-living bacteria (FLB) from aquatic environments during phytoplankton blooms differ in their physical distance from algae. Both the interactions within PAB and FLB community fractions and their relationship with the surrounding environmental properties are largely unknown. Here, by using high-throughput sequencing and network-based analyses, we compared the community and network characteristics of PAB and FLB from a plateau lake during a bloom. Results showed that PAB and FLB differed significantly in diversity, structure and microbial connecting network. PAB communities were characterized by highly similar bacterial community structure in different sites, tighter network connections, important topological roles for the bloom-causing and Alphaproteobacteria, especially for the potentially nitrogen-fixing () and algicidal bacteria ( sp.). FLB communities were sensitive to the detected environmental factors and were characterized by significantly higher bacterial diversity, less connectivity, larger network size and marginal role of . In both networks, covariation among bacterial taxa was extensive (>88% positive connections), and bacteria potentially affiliated with biogeochemical cycling of nitrogen (i.e., denitrification, nitrogen-fixation and nitrite-oxidization) were important in occupying module hubs, such as , and . These findings highlight the importance of considering microbial network interactions for the understanding of blooms.
浮游植物水华期间,水生环境中的颗粒相关细菌(PAB)和自由生活细菌(FLB)与藻类的物理距离不同。PAB和FLB群落组分内部的相互作用及其与周围环境特性的关系在很大程度上尚不清楚。在此,我们通过高通量测序和基于网络的分析,比较了高原湖泊水华期间PAB和FLB的群落及网络特征。结果表明,PAB和FLB在多样性、结构和微生物连接网络方面存在显著差异。PAB群落的特征是不同位点的细菌群落结构高度相似、网络连接更紧密、对引发水华的细菌和变形菌门(特别是潜在固氮菌( )和杀藻细菌( 菌))具有重要的拓扑作用。FLB群落对检测到的环境因子敏感,其特征是细菌多样性显著更高、连通性更低、网络规模更大以及 发挥边缘作用。在两个网络中,细菌分类群之间的协变广泛(>88%为正连接),可能与氮生物地球化学循环(即反硝化、固氮和亚硝酸盐氧化)相关的细菌在占据模块枢纽(如 、 和 )方面很重要。这些发现凸显了考虑微生物网络相互作用对于理解水华的重要性。