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一只患有眼皮肤白化病的斗牛獒犬的SLC45A2基因发生单碱基缺失。

A single base deletion in the SLC45A2 gene in a Bullmastiff with oculocutaneous albinism.

作者信息

Caduff M, Bauer A, Jagannathan V, Leeb T

机构信息

Institute of Genetics, Vetsuisse Faculty, University of Bern, 3001, Bern, Switzerland.

DermFocus, University of Bern, 3001, Bern, Switzerland.

出版信息

Anim Genet. 2017 Oct;48(5):619-621. doi: 10.1111/age.12582. Epub 2017 Jul 24.

Abstract

Oculocutaneous albinism type 4 (OCA4) in humans and similar phenotypes in many animal species are caused by variants in the SLC45A2 gene, encoding a putative sugar transporter. In dog, two independent SLC45A2 variants are known that cause oculocutaneous albinism in Doberman Pinschers and several small dog breeds respectively. For the present study, we investigated a Bullmastiff with oculocutaneous albinism. The affected dog was highly inbred and resulted from the mating of a sire to its own grandmother. We obtained whole genome sequence data from the affected dog and searched specifically for variants in candidate genes known to cause albinism. We detected a single base deletion in exon 6 of the SLC45A2 gene (NM_001037947.1:c.1287delC) that has not been reported thus far. This deletion is predicted to result in an early premature stop codon. It was confirmed by Sanger sequencing and perfectly co-segregated with the phenotype in the available family members. We genotyped 174 unrelated dogs from diverse breeds, all of which were homozygous wildtype. We therefore suggest that SLC45A2:c.1287delC causes the observed oculocutaneous albinism in the affected Bullmastiff.

摘要

人类的4型眼皮肤白化病(OCA4)以及许多动物物种中的类似表型是由SLC45A2基因的变异引起的,该基因编码一种假定的糖转运蛋白。在犬类中,已知有两种独立的SLC45A2变异分别导致杜宾犬和几个小型犬种出现眼皮肤白化病。在本研究中,我们调查了一只患有眼皮肤白化病的斗牛獒。这只患病犬高度近亲繁殖,是由一只公犬与其祖母交配产生的。我们从这只患病犬身上获得了全基因组序列数据,并专门在已知会导致白化病的候选基因中寻找变异。我们在SLC45A2基因的第6外显子中检测到一个单碱基缺失(NM_001037947.1:c.1287delC),该缺失迄今尚未见报道。预计这种缺失会导致一个过早的终止密码子。通过桑格测序得到了证实,并且在现有家族成员中与表型完全共分离。我们对来自不同品种的174只无关犬进行了基因分型,所有犬均为纯合野生型。因此,我们认为SLC45A2:c.1287delC导致了患病斗牛獒出现观察到的眼皮肤白化病。

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