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大鼠肝脏再生过程中与碳水化合物代谢相关蛋白质的表达谱

Expressions Profiles of the Proteins Associated with Carbohydrate Metabolism in Rat Liver Regeneration.

作者信息

Yin Li, Chang Cuifang, Xu Cunshuan

机构信息

College of Life Science, Henan Normal University, Xinxiang, Henan Province 453007, China.

State Key Laboratory Cultivation Base for Cell Differentiation Regulation and Henan Bioengineering Key Laboratory, Henan Normal University, Xinxiang, Henan Province 453007, China.

出版信息

Biomed Res Int. 2017;2017:8428926. doi: 10.1155/2017/8428926. Epub 2017 Jul 2.

Abstract

Liver has a very amazing ability to regenerate from the remnant liver after injury or partial hepatectomy (PH). Carbohydrate metabolism plays a critical role in regeneration. Many signaling pathways are involved in the metabolism process. We analyzed the changes of proteins at 0-36 h after PH in rats using isobaric tags for relative and absolute quantitation (iTRAQ) coupled with LC-MS/MS-based quantitative proteomics strategy. The results showed that 110 proteins and 5 signaling pathways related to carbohydrate metabolism in rat LR changed significantly. Based on a motif discovery method performed by iRegulon, we identified for the first time that the transcription factor SPIB whose motif was enriched among the differentiated genes associated with carbohydrate metabolism may play an important role in liver regeneration for the first time. The findings of this research provide a molecular basis for further unrevealing the mechanism of regeneration at priming stage (0-6 h) and proliferation stage (6-36 h) of LR in rats. At the same time, our studies provide more novel evidence for the signaling pathways which regulate carbohydrate metabolism from proteomics level. This study can provide some new thinking of liver regeneration and treatment of diseases associated with glucose metabolism.

摘要

肝脏具有从损伤或部分肝切除(PH)后的残余肝脏中再生的惊人能力。碳水化合物代谢在肝脏再生中起着关键作用。许多信号通路参与了这一代谢过程。我们采用相对和绝对定量等压标签(iTRAQ)结合基于液相色谱-串联质谱的定量蛋白质组学策略,分析了大鼠PH后0至36小时肝脏中蛋白质的变化。结果显示,大鼠肝脏中110种与碳水化合物代谢相关的蛋白质和5条信号通路发生了显著变化。基于iRegulon进行的基序发现方法,我们首次鉴定出其基序在与碳水化合物代谢相关的分化基因中富集的转录因子SPIB可能在肝脏再生中发挥重要作用。本研究结果为进一步揭示大鼠肝脏再生起始阶段(0至6小时)和增殖阶段(6至36小时)的再生机制提供了分子基础。同时,我们的研究从蛋白质组学水平为调节碳水化合物代谢的信号通路提供了更多新证据。本研究可为肝脏再生及与糖代谢相关疾病的治疗提供一些新的思路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d92f/5511655/f15807f29939/BMRI2017-8428926.001.jpg

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