Department of Science and Environment (INM), Roskilde University. 1 Universitetsvej, Build. 28., DK-4000, Roskilde Denmark.
Novozymes A/S, Krogshøjvej 36, DK-2880, Bagsværd, Denmark.
Enzyme Microb Technol. 2017 Oct;105:45-50. doi: 10.1016/j.enzmictec.2017.06.009. Epub 2017 Jun 13.
Even though many enzyme processes occur at the interface of an insoluble substrate, these reactions are generally much less studied than homogenous enzyme reactions in the aqueous bulk. Interfacial (or heterogeneous) enzyme reactions involve several reaction steps, and the established experimental approach to elucidate multi-step reactions is transient (or pre steady-state) kinetics. A key requirement for pre steady-state measurements is good time resolution, and while this has been amply achieved in different commercial instruments, they are generally not applicable to precipitating suspensions of insoluble substrate. Perhaps for this reason, transient kinetics has rarely been reported for heterogeneous enzyme reactions. Here, we describe a quenched-flow system using peristaltic pumps and stirred substrate suspensions with a dead time below 100ms. The general performance was verified by alkali catalyzed hydrolysis of 2,4-dinitrophenyl acetate (DNPA), and the applicability to heterogeneous reactions was documented by two cellulases (Cel7A and Cel7B) acting on suspensions of microcrystalline cellulose (Avicel) at different loads up to 15g/l. The results showed distinctive differences between the two enzymes. In particular, we found that endo-lytic Cel7B combined very quickly with the substrate and reached the maximal activity within the dead-time of the instrument. Conversely, exo-lytic Cel7A showed a much slower initiation with maximal activity after 5-8s and a 10-fold lower turnover. We suggest that the instrument may provide an important tool in attempts to elucidate the mechanism of cellulases and other enzymes' action on insoluble substrate.
尽管许多酶促反应发生在不溶性底物的界面上,但这些反应通常比均相酶反应在水相中受到的研究要少得多。界面(或异相)酶反应涉及几个反应步骤,阐明多步反应的既定实验方法是瞬态(或预稳定态)动力学。预稳定状态测量的一个关键要求是良好的时间分辨率,虽然这在不同的商业仪器中已经得到充分实现,但它们通常不适用于不溶性底物的沉淀悬浮液。也许由于这个原因,异相酶反应的瞬态动力学很少被报道。在这里,我们描述了一种使用蠕动泵和搅拌底物悬浮液的猝灭流系统,其死区时间低于 100ms。通过碱催化 2,4-二硝基苯乙酸酯(DNPA)的水解验证了一般性能,并通过两种纤维素酶(Cel7A 和 Cel7B)在不同负载下作用于微晶纤维素(Avicel)悬浮液来证明其适用于异相反应,负载高达 15g/l。结果显示两种酶之间存在明显差异。特别是,我们发现内切酶 Cel7B 与底物结合非常迅速,并在仪器的死区时间内达到最大活性。相反,外切酶 Cel7A 的起始速度要慢得多,最大活性出现在 5-8s 后,周转率低 10 倍。我们建议该仪器可能为阐明纤维素酶和其他酶在不溶性底物上的作用机制提供重要工具。