Khunnamwong Pannida, Ribeiro José R A, Garcia Karina M, Hagler Allen N, Takashima Masako, Ohkuma Moriya, Endoh Rikiya, Sugita Takashi, Jindamorakot Sasitorn, Limtong Savitree
Department of Microbiology, Faculty of Science, Kasetsart University, Bangkok, Thailand.
Departamento de Microbiologia Geral, Instituto de Microbiologia Prof. Paulo de Goes, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.
Int J Syst Evol Microbiol. 2017 Aug;67(8):2628-2633. doi: 10.1099/ijsem.0.001988. Epub 2017 Aug 4.
Nine strains representing a single anamorphic novel yeast species in dispersed tropical and subtropical habitats were isolated from sugarcane leaf tissue (DMKU-SE24, DMKU-SE45T, DMKU-SE129 and DMKU-SE134) and corn leaf tissue (DMKU-CE36) in Thailand, phylloplane and rhizoplane of sugarcane in Brazil (IMUFRJ 52018 and IMUFRJ 52019), bromeliad leaf tissue in Brazil (IMUFRJ 51954) and plant leaf in Japan (IPM31-24). These strains showed identical or only 1 nt substitution in the sequences of the D1/D2 region of the LSU rRNA gene and 0-5 nt substitutions in the internal transcribed spacer (ITS) region. Phylogenetic analysis based on the combined sequences of the ITS and the D1/D2 regions showed that the eight of these strains represented a single species in the genus Occultifur that was distinct from related species. Occultifur kilbournensis was the most closely related species, but with 0.9-1.2 % nucleotide substitutions in the D1/D2 region of the LSU rRNA gene, and 2.4-2.6 % nucleotide substitutions in the ITS region. They are therefore considered to represent a novel species of the genus Occultifur although the formation of basidia was not observed. The name Occultifur plantarum f.a., sp. nov. is proposed. The type strain is DMKU-SE45T (=CBS 14554T=TBRC 6561T).
从泰国甘蔗叶组织(DMKU - SE24、DMKU - SE45T、DMKU - SE129和DMKU - SE134)和玉米叶组织(DMKU - CE36)、巴西甘蔗的叶表面和根际(IMUFRJ 52018和IMUFRJ 52019)、巴西凤梨科植物叶组织(IMUFRJ 51954)以及日本植物叶(IPM31 - 24)中分离出了9株菌株,它们代表了一种分布于热带和亚热带地区的无性型新酵母物种。这些菌株在大亚基核糖体RNA基因D1/D2区域的序列中显示出相同或仅有1个核苷酸替换,在内转录间隔区(ITS)区域有0 - 5个核苷酸替换。基于ITS和D1/D2区域联合序列的系统发育分析表明,其中8株菌株代表了隐糠秕孢属中的一个单一物种,与相关物种不同。基尔伯恩隐糠秕孢是亲缘关系最密切的物种,但在大亚基核糖体RNA基因的D1/D2区域有0.9 - 1.2%的核苷酸替换,在ITS区域有2.4 - 2.6%的核苷酸替换。因此,尽管未观察到担子的形成,但它们被认为代表了隐糠秕孢属的一个新物种。提出新物种名称为植物隐糠秕孢Occultifur plantarum f.a., sp. nov.。模式菌株为DMKU - SE45T(=CBS 14554T=TBRC 6561T)。