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热带隐球菌 f.a.,新种,一种从热带地区分离到的新型胶状有隔担子菌酵母。

Occultifur tropicalis f.a., sp. nov., a novel cystobasidiomycetous yeast species isolated from tropical regions.

机构信息

Department of Microbiology, Faculty of Science, Kasetsart University, Bangkok, Thailand.

Bioresources Technology Unit, National Center for Genetic Engineering and Biotechnology (BIOTEC), Pathumthani, Thailand.

出版信息

Int J Syst Evol Microbiol. 2015 May;65(Pt 5):1578-1582. doi: 10.1099/ijs.0.000140. Epub 2015 Feb 23.

Abstract

Five strains representing a single novel anamorphic yeast species were isolated from sugar cane. Two strains were from tissue (DMKU-SE38, DMKU-SE59(T)) and two from the external surface (DMKU-SP385, DMKU-SP403) of leaves collected in Thailand and the fifth (IMUFRJ 52020) from the rhizoplane of sugar cane in an organically cultivated field in Brazil. On the basis of sequence analysis of the D1/D2 region of the large subunit (LSU) rRNA gene and the internal transcribed spacer (ITS) region, they were classified as representing a single species of the genus Occultifur. The sequences of the D1/D2 region of the LSU rRNA genes and the ITS regions of the five strains were either identical or differed from each other by only one nucleotide substitution. The novel species was related most closely to Occultifur brasiliensis f.a. CBS 12687(T) but with 0.7-1.0% nucleotide substitutions (4-6 nt) in the D1/D2 region of the LSU rRNA gene and 2.5-2.7% nucleotide substitutions (14-15 nt) in the ITS region. The name Occultifur tropicalis f.a., sp. nov. is proposed. The type strain is DMKU-SE59(T) ( =BCC 61184(T) =NBRC 109696(T) =CBS 13389 (T)).

摘要

从甘蔗中分离到五株代表单一新型隐球菌酵母种的菌株。其中两株来自组织(DMKU-SE38、DMKU-SE59(T)),两株来自叶片外表面(DMKU-SP385、DMKU-SP403),第五株(IMUFRJ 52020)来自巴西有机种植田的甘蔗根际。基于大亚基(LSU)rRNA 基因 D1/D2 区和内部转录间隔区(ITS)序列分析,它们被归类为代表一个单一的隐球菌属种。五个菌株的 LSU rRNA 基因 D1/D2 区和 ITS 区的序列要么完全相同,要么彼此仅相差一个核苷酸替换。新种与巴西隐球菌 f.a. CBS 12687(T)最为密切相关,但 LSU rRNA 基因 D1/D2 区的核苷酸替换率为 0.7-1.0%(4-6nt),ITS 区的核苷酸替换率为 2.5-2.7%(14-15nt)。提议使用Occultifur tropicalis f.a.,sp. nov.这个名称。其模式株为 DMKU-SE59(T)( =BCC 61184(T) =NBRC 109696(T) =CBS 13389 (T))。

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