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嗅神经母细胞瘤的全面分子分析确定了潜在的可靶向扩增。

Comprehensive Molecular Profiling of Olfactory Neuroblastoma Identifies Potentially Targetable Amplifications.

机构信息

Department of Pathology, University of Michigan Medical School, Ann Arbor, Michigan.

Michigan Center for Translational Pathology, University of Michigan Medical School, Ann Arbor, Michigan.

出版信息

Mol Cancer Res. 2017 Nov;15(11):1551-1557. doi: 10.1158/1541-7786.MCR-17-0135. Epub 2017 Aug 3.

Abstract

Olfactory neuroblastomas (ONBs), also known as esthesioneuroblastomas, are malignant round-cell tumors that represent up to 5% of sinonasal malignancies. Despite their aggressive course, molecular studies of ONBs have been limited, and targeted therapies are lacking. To identify potential oncogenic drivers and targetable pathways in ONBs, we characterized 20 ONBs, including archived ONBs profiled by targeted, multiplexed PCR (mxPCR)-based DNA next-generation sequencing (NGS) of the coding sequence of over 400 cancer-relevant genes ( = 16), mxPCR-based RNA NGS of 108 target genes ( = 15), and 2 ONBs profiled by comprehensive hybrid-capture-based clinical grade NGS of >1,500 genes. Somatic mutations were infrequent in our cohort, with 7 prioritized nonsynonymous mutations in 5 of 18 (28%) ONBs, and no genes were recurrently mutated. We detected arm/chromosome-level copy-number alterations in all tumors, most frequently gains involving all or part of chromosome 20, chromosome 5, and chromosome 11. Recurrent focal amplifications, often but not exclusively in the context of arm-level gains, included [ = 4/18 (22%) tumors] and the targetable receptor tyrosine kinase [ = 5/18 (28%) tumors]. Targeted RNA NGS confirmed high expression of in ONB (at levels equivalent to bladder cancer), with the highest expression observed in -amplified ONB cases. Importantly, our findings suggest that FGFR3 may be a therapeutic target in a subset of these aggressive tumors. ONBs harbor recurrent chromosomal copy-number changes, including amplification associated with overexpression. Hence, FGFR3 may represent a novel therapeutic target in these tumors. .

摘要

嗅神经母细胞瘤(ONB),也称为嗅神经母细胞瘤,是一种恶性圆形细胞肿瘤,占鼻腔鼻窦恶性肿瘤的 5%。尽管其侵袭性很强,但对 ONB 的分子研究一直很有限,缺乏靶向治疗。为了确定 ONB 中的潜在致癌驱动因素和可靶向途径,我们对 20 例 ONB 进行了特征分析,包括通过靶向、多重 PCR(mxPCR)进行的基于编码序列的下一代测序(NGS)进行的 ONB 存档分析,超过 400 个癌症相关基因(= 16),108 个靶基因的 mxPCR 基于 RNA 的 NGS(= 15),以及 2 例 ONB 通过 >1500 个基因的综合杂交捕获临床级 NGS 进行的分析。我们的队列中体细胞突变很少,18 例 ONB 中有 7 例(28%)存在 5 个非同义突变,没有基因反复突变。我们在所有肿瘤中均检测到染色体臂/染色体水平的拷贝数改变,最常见的增益涉及整条或部分 20 号染色体、5 号染色体和 11 号染色体。常但非排他性地在臂水平增益的情况下,反复出现局灶性扩增,包括[= 4/18(22%)肿瘤]和可靶向受体酪氨酸激酶[= 5/18(28%)肿瘤]。靶向 RNA NGS 证实 ONB 中[与膀胱癌相当的水平]的高表达,在 -扩增的 ONB 病例中观察到最高表达。重要的是,我们的发现表明 FGFR3 可能是这些侵袭性肿瘤的一个治疗靶点。ONB 具有反复发生的染色体拷贝数变化,包括与过表达相关的扩增。因此,FGFR3 可能代表这些肿瘤中的一个新的治疗靶点。

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