Pérez-Ruíz Raúl, Lence Emilio, Andreu Inmaculada, Limones-Herrero Daniel, González-Bello Concepción, Miranda Miguel A, Jiménez M Consuelo
Departamento de Química/Instituto de Tecnología Química UPV-CSIC, Universitat Politècnica de Valencia, Camino de Vera s/n, 46071, Valencia, Spain.
Present address: Instituto Imdea Energía, Parque Tecnológico de Móstoles, Av. Ramón de la Sagra, 3., 28935, Móstoles, Madrid, Spain.
Chemistry. 2017 Oct 9;23(56):13986-13994. doi: 10.1002/chem.201702643. Epub 2017 Sep 12.
The covalent binding of β-lactams to proteins upon photochemical activation has been demonstrated by using an integrated approach that combines photochemical, proteomic and computational studies, selecting human serum albumin (HSA) as a target protein and ezetimibe (1) as a probe. The results have revealed a novel protein haptenation pathway for this family of drugs that is an alternative to the known nucleophilic ring opening of β-lactams by the free amino group of lysine residues. Thus, photochemical ring splitting of the β-lactam ring, following a formal retro-Staudinger reaction, gives a highly reactive ketene intermediate that is trapped by the neighbouring lysine residues, leading to an amide adduct. For the investigated 1/HSA system, covalent modification of residues Lys414 and Lys525, which are located in sub-domains IIIA and IIIB, respectively, occurs. The observed photobinding may constitute the key step in the sequence of events leading to photoallergy. Docking and molecular dynamics simulation studies provide an insight into the molecular basis of the selectivity of 1 for these HSA sub-domains and the covalent modification mechanism. Computational studies also reveal positive cooperative binding of sub-domain IIIB that explains the experimentally observed modification of Lys414, which is located in a barely accessible pocket (sub-domain IIIA).
通过结合光化学、蛋白质组学和计算研究的综合方法,已证明了β-内酰胺在光化学活化后与蛋白质的共价结合,选择人血清白蛋白(HSA)作为靶蛋白,依折麦布(1)作为探针。结果揭示了这类药物一种新的蛋白质半抗原化途径,这是已知的β-内酰胺通过赖氨酸残基的游离氨基进行亲核开环反应的替代途径。因此,在形式上的逆施陶丁格反应之后,β-内酰胺环的光化学开环产生了一种高反应性的乙烯酮中间体,该中间体被相邻的赖氨酸残基捕获,导致形成酰胺加合物。对于所研究的1/HSA系统,分别位于IIIA和IIIB亚结构域的Lys414和Lys525残基发生了共价修饰。观察到的光结合可能是导致光过敏的一系列事件中的关键步骤。对接和分子动力学模拟研究深入了解了1对这些HSA亚结构域的选择性的分子基础以及共价修饰机制。计算研究还揭示了IIIB亚结构域的正协同结合,这解释了实验观察到的位于几乎无法接近的口袋(IIIA亚结构域)中的Lys414的修饰。