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一种 1.5MDa 黏附素的结构,该黏附素可使其南极细菌与硅藻和冰结合。

Structure of a 1.5-MDa adhesin that binds its Antarctic bacterium to diatoms and ice.

机构信息

Protein Function Discovery Group and Department of Biomedical and Molecular Sciences, Queen's University, Kingston, Ontario K7L 3N6, Canada.

Institute for Complex Molecular Systems, Eindhoven University of Technology, 5600 MD Eindhoven, Netherlands.

出版信息

Sci Adv. 2017 Aug 9;3(8):e1701440. doi: 10.1126/sciadv.1701440. eCollection 2017 Aug.

DOI:10.1126/sciadv.1701440
PMID:28808685
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5550230/
Abstract

Bacterial adhesins are modular cell-surface proteins that mediate adherence to other cells, surfaces, and ligands. The Antarctic bacterium uses a 1.5-MDa adhesin comprising over 130 domains to position it on ice at the top of the water column for better access to oxygen and nutrients. We have reconstructed this 0.6-μm-long adhesin using a "dissect and build" structural biology approach and have established complementary roles for its five distinct regions. Domains in region I (RI) tether the adhesin to the type I secretion machinery in the periplasm of the bacterium and pass it through the outer membrane. RII comprises ~120 identical immunoglobulin-like β-sandwich domains that rigidify on binding Ca to project the adhesion regions RIII and RIV into the medium. RIII contains ligand-binding domains that join diatoms and bacteria together in a mixed-species community on the underside of sea ice where incident light is maximal. RIV is the ice-binding domain, and the terminal RV domain contains several "repeats-in-toxin" motifs and a noncleavable signal sequence that target proteins for export via the type I secretion system. Similar structural architecture is present in the adhesins of many pathogenic bacteria and provides a guide to finding and blocking binding domains to weaken infectivity.

摘要

细菌黏附素是一种模块化的细胞表面蛋白,介导与其他细胞、表面和配体的黏附。这种来自南极洲的细菌使用一种由超过 130 个结构域组成的 1.5MDa 黏附素来将其定位在水柱的顶部冰面上,以便更好地获取氧气和营养物质。我们使用“解剖和构建”的结构生物学方法重建了这种 0.6μm 长的黏附素,并确定了其五个不同区域的互补作用。区域 I(RI)的结构域将黏附素固定在细菌周质中的 I 型分泌机制上,并使其穿过外膜。RII 包含约 120 个相同的免疫球蛋白样β-折叠结构域,这些结构域在结合 Ca 后会变硬,从而将黏附区域 RIII 和 RIV 投射到介质中。RIII 包含与硅藻和细菌结合的配体结合结构域,在海冰下方的混合物种群落中,这些结构域结合在一起,那里的入射光最强。RIV 是冰结合结构域,末端的 RV 结构域包含几个“重复毒素”基序和一个不可切割的信号序列,这些序列将蛋白质靶向通过 I 型分泌系统进行输出。许多致病性细菌的黏附素都具有类似的结构架构,为寻找和阻断结合域提供了指导,以减弱感染力。

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