Tian Chengzhe, Semsey Szabolcs, Mitarai Namiko
Niels Bohr Institute, University of Copenhagen, Blegdamsvej 17, 2100 Copenhagen Ø, Denmark.
Department of Biology, University of Copenhagen, Ole Maal?es Vej 5, 2200 Copenhagen N, Denmark.
Nucleic Acids Res. 2017 Aug 21;45(14):8180-8189. doi: 10.1093/nar/gkx552.
Toxin-antitoxin (TA) loci are widespread in bacteria including important pathogenic species. Recent studies suggest that TA systems play a key role in persister formation. However, the persistence phenotype shows only weak dependence on the number of TA systems, i.e. they are functionally redundant. We use a mathematical model to investigate the interaction of multiple TA systems in the switching between growth and persistence. We explore two scenarios: (i) TA systems are bistable and each TA system experiences its own noise and (ii) the noise in the level of common stress signal (e.g. (p)ppGpp) coordinates all TA systems simultaneously. We find that in the first scenario the exit from the persister state strongly depends on the number of TA systems. However in the second case, we could reproduce the weak dependence. The duration of the high (p)ppGpp state was found to be the key parameter for persistence. The (p)ppGpp-driven synchronized transition of all TA systems results in the redundancy.
毒素-抗毒素(TA)基因座在包括重要致病菌种在内的细菌中广泛存在。最近的研究表明,TA系统在持留菌形成中起关键作用。然而,持留菌表型仅对TA系统的数量表现出较弱的依赖性,即它们在功能上是冗余的。我们使用数学模型来研究多个TA系统在生长和持留之间转换过程中的相互作用。我们探讨了两种情况:(i)TA系统是双稳态的,且每个TA系统经历其自身的噪声;(ii)共同应激信号(如(p)ppGpp)水平的噪声同时协调所有TA系统。我们发现,在第一种情况下,从持留菌状态退出强烈依赖于TA系统的数量。然而,在第二种情况下,我们能够重现这种弱依赖性。发现高(p)ppGpp状态的持续时间是持留的关键参数。(p)ppGpp驱动的所有TA系统的同步转变导致了冗余。