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中国东部江苏沿不同围填海历史的细菌群落结构演变。

Shift of bacterial community structure along different coastal reclamation histories in Jiangsu, Eastern China.

机构信息

Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, China.

State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, China.

出版信息

Sci Rep. 2017 Aug 30;7(1):10096. doi: 10.1038/s41598-017-10608-3.

Abstract

Tideland reclamation has drastic effects on coastal ecosystem involved in soil microorganisms. However, the knowledge regarding temporal variations of microbial community along reclamation chronosequence and their environmental variable predictor is still poorly known. Using Illumina sequencing, we qualified bacterial community composition in soils collected from one tideland and four reclamation stages, i.e. 2-year, 7-year, 19-year and 39-year in Jiangsu, Eastern China. Across all samples, the dominant groups were Proteobacteria, Bacteroidete, Acidobacteria, Planctomycetes and Chloroflexi. Reclamation activity and its histories greatly altered bacterial community structure, and only 0.28% of phylotypes were shared by five soils. Specially, some typical marine bacteria (Gaetulibacter, Alcanivorax …) disappeared in reclamation soils, while other groups (Niabella, Flavisolibacter…) were gradually eminent. Generally, bacterial diversity and richness increased with reclamation histories. Bacterial community was correlated with most of soil physico-chemical properties. Amongst, mean weight diameter of soil aggregates (MWD) was detected as a primary factor predicting bacterial community composition. Together, our results indicated that effects of reclamation on bacterial community varied with diked histories, and MWD was a major factor predicting bacterial community during progressive reclamation. These findings offer predicting case study for understanding the impact of reclamation and its histories on microbial community in a coastal ecosystem.

摘要

围填海活动对涉及土壤微生物的沿海生态系统有很大的影响。然而,对于微生物群落沿着围填海时间序列的时间变化及其环境变量预测因子的知识仍然知之甚少。本研究使用 Illumina 测序,对中国东部江苏省一个围填海区和四个围填海阶段(2 年、7 年、19 年和 39 年)采集的土壤中的细菌群落组成进行了定量分析。在所有样本中,优势类群为变形菌门、拟杆菌门、酸杆菌门、浮霉菌门和绿弯菌门。围填海活动及其历史极大地改变了细菌群落结构,只有 0.28%的菌落在五个土壤中是共有的。特别是一些典型的海洋细菌(Gaetulibacter、Alcanivorax 等)在围填海土壤中消失,而其他一些群体(Niabella、Flavisolibacter 等)逐渐占优势。一般来说,细菌多样性和丰富度随围填海历史而增加。细菌群落与大多数土壤理化性质相关。其中,土壤团聚体平均重量直径(MWD)被检测为预测细菌群落组成的主要因素。总之,研究结果表明,围填海对细菌群落的影响随围垦历史而变化,MWD 是预测围填海过程中细菌群落的主要因素。这些发现为理解围填海及其历史对沿海生态系统中微生物群落的影响提供了预测案例研究。

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