Keirsse-Haquin Julie, Picaud Thierry, Bordes Luc, de Gracia Adrienne Gomez, Desbois Alain
Institut de Biologie Intégrative de la Cellule, UMR 9198 CNRS-CEA-Université Paris Sud, CEA Saclay, 91191, Gif-sur-Yvette Cedex, France.
Ecole Nationale Supérieure des Mines, 44300, Nantes, France.
Eur Biophys J. 2018 Apr;47(3):205-223. doi: 10.1007/s00249-017-1245-3. Epub 2017 Sep 9.
NADH peroxidase (Npx) and mercuric ion reductase (MerA) are flavoproteins belonging to the pyridine nucleotide:disulfide oxidoreductases (PNDO) and catalyzing the reduction of toxic substrates, i.e., hydrogen peroxide and mercuric ion, respectively. To determine the role of the flavin adenine dinucleotide (FAD) in the detoxification mechanism, the resonance Raman (RR) spectra of these enzymes under various redox and ligation states have been investigated using blue and/or near-UV excitation(s). These data were compared to those previously obtained for glutathione reductase (GR), another enzyme of the PNDO family, but catalyzing the reduction of oxidized glutathione. Spectral differences have been detected for the marker bands of the isoalloxazine ring of Npx, MerA, and GR. They provide evidence for different catalytic mechanisms in these flavoproteins. The RR modes of the oxidized and two-electron reduced (EH) forms of Npx are related to very tight flavin-protein interactions maintaining a nearly planar conformation of the isoalloxazine tricycle, a low level of H-bonding at the N/N and O/O sites, and a strong H-bond at NH. They also indicate minimal changes in FAD structure and environment upon either NAD(H) binding or reduction of the sulfinic redox center. All these spectroscopic data support an enzyme functioning centered on the Cys-SO/Cys-S redox moiety and a neighbouring His residue. On the contrary, the RR data on various functional forms of MerA are indicative of a modulation of both ring II distortion and H-bonding states of the N site and ring III. The Cd(II) binding to the EH-NADP(H) complexes, biomimetic intermediates in the reaction of Hg(II) reduction, provokes important spectral changes. They are interpreted in terms of flattening of the isoalloxazine ring and large decreases in H-bonding at the N site and ring III. The large flexibility of the FAD structure and environment in MerA is in agreement with proposed mechanisms involving C(flavin) adducts.
NADH过氧化物酶(Npx)和汞离子还原酶(MerA)是属于吡啶核苷酸:二硫化物氧化还原酶(PNDO)的黄素蛋白,分别催化有毒底物过氧化氢和汞离子的还原反应。为了确定黄素腺嘌呤二核苷酸(FAD)在解毒机制中的作用,利用蓝光和/或近紫外光激发,研究了这些酶在各种氧化还原和连接状态下的共振拉曼(RR)光谱。将这些数据与先前获得的谷胱甘肽还原酶(GR)的数据进行了比较,GR是PNDO家族的另一种酶,但催化氧化型谷胱甘肽的还原反应。已检测到Npx、MerA和GR异咯嗪环标记带的光谱差异。它们为这些黄素蛋白中不同的催化机制提供了证据。Npx氧化态和双电子还原态(EH)形式的RR模式与非常紧密的黄素-蛋白质相互作用有关,这种相互作用维持了异咯嗪三环的近平面构象,在N/N和O/O位点的氢键水平较低,而在NH处有一个强氢键。它们还表明,在NAD(H)结合或亚磺酸氧化还原中心还原时,FAD结构和环境的变化最小。所有这些光谱数据都支持一种以半胱氨酸-SO/半胱氨酸-S氧化还原部分和相邻的组氨酸残基为中心的酶功能。相反,MerA各种功能形式的RR数据表明,II环畸变以及N位点和III环的氢键状态都发生了调制。Cd(II)与EH-NADP(H)复合物结合,这是Hg(II)还原反应中的仿生中间体,会引起重要的光谱变化。这些变化可以用异咯嗪环变平以及N位点和III环氢键大幅减少来解释。MerA中FAD结构和环境的高度灵活性与涉及C(黄素)加合物的拟议机制一致。