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快速发现牛中的从头有害突变增强了家畜作为模型物种的价值。

Rapid Discovery of De Novo Deleterious Mutations in Cattle Enhances the Value of Livestock as Model Species.

机构信息

GABI, INRA, AgroParisTech, Université Paris-Saclay, 78350, Jouy-en-Josas, France.

LREG, CEA, Université Paris-Saclay, 78350, Jouy-en-Josas, France.

出版信息

Sci Rep. 2017 Sep 13;7(1):11466. doi: 10.1038/s41598-017-11523-3.

Abstract

In humans, the clinical and molecular characterization of sporadic syndromes is often hindered by the small number of patients and the difficulty in developing animal models for severe dominant conditions. Here we show that the availability of large data sets of whole-genome sequences, high-density SNP chip genotypes and extensive recording of phenotype offers an unprecedented opportunity to quickly dissect the genetic architecture of severe dominant conditions in livestock. We report on the identification of seven dominant de novo mutations in CHD7, COL1A1, COL2A1, COPA, and MITF and exploit the structure of cattle populations to describe their clinical consequences and map modifier loci. Moreover, we demonstrate that the emergence of recessive genetic defects can be monitored by detecting de novo deleterious mutations in the genome of bulls used for artificial insemination. These results demonstrate the attractiveness of cattle as a model species in the post genomic era, particularly to confirm the genetic aetiology of isolated clinical case reports in humans.

摘要

在人类中,散发性综合征的临床和分子特征通常受到患者数量少和难以为严重显性疾病开发动物模型的阻碍。在这里,我们表明,大量全基因组序列、高密度 SNP 芯片基因型和广泛记录表型的数据的可用性为快速剖析家畜严重显性疾病的遗传结构提供了前所未有的机会。我们报告了在 CHD7、COL1A1、COL2A1、COPA 和 MITF 中鉴定出七个显性新生突变,并利用牛群的结构描述其临床后果和定位修饰基因座。此外,我们证明通过检测用于人工授精的公牛基因组中的新生有害突变,可以监测隐性遗传缺陷的出现。这些结果表明,在后基因组时代,牛作为一种模型物种具有吸引力,特别是用于确认人类孤立临床病例报告的遗传病因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/da71/5597596/22b69d65ab09/41598_2017_11523_Fig1_HTML.jpg

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