一种基于线性泛素的探针,用于高效和选择性检测去泛素化酶 OTULIN。
A Linear Diubiquitin-Based Probe for Efficient and Selective Detection of the Deubiquitinating Enzyme OTULIN.
机构信息
Research Unit Cellular Signal Integration, Institute of Molecular Toxicology and Pharmacology, Helmholtz Zentrum München - German Research Center for Environmental Health, Ingolstaedter Landstrasse 1, 85764 Neuherberg, Germany.
Medical Research Council Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge CB2 0QH, UK.
出版信息
Cell Chem Biol. 2017 Oct 19;24(10):1299-1313.e7. doi: 10.1016/j.chembiol.2017.08.006. Epub 2017 Sep 14.
The methionine 1 (M1)-specific deubiquitinase (DUB) OTULIN acts as a negative regulator of nuclear factor κB signaling and immune homeostasis. By replacing Gly76 in distal ubiquitin (Ub) by dehydroalanine we designed the diubiquitin (diUb) activity-based probe Ub-Ub (OTULIN activity-based probe [ABP]) that couples to the catalytic site of OTULIN and thereby captures OTULIN in its active conformation. The OTULIN ABP displays high selectivity for OTULIN and does not label other M1-cleaving DUBs, including CYLD. The only detectable cross-reactivities were the labeling of USP5 (Isopeptidase T) and an ATP-dependent assembly of polyOTULIN ABP chains via Ub-activating E1 enzymes. Both cross-reactivities were abolished by the removal of the C-terminal Gly in the ABP's proximal Ub, yielding the specific OTULIN probe Ub-Ub (OTULIN ABPΔG76). Pull-downs demonstrate that substrate-bound OTULIN associates with the linear ubiquitin chain assembly complex (LUBAC). Thus, we present a highly selective ABP for OTULIN that will facilitate studying the cellular function of this essential DUB.
蛋氨酸 1(M1)特异性去泛素化酶(DUB)OTULIN 作为核因子 κB 信号和免疫动态平衡的负调节剂。通过用脱水丙氨酸取代远端泛素(Ub)中的甘氨酸 76,我们设计了二泛素(diUb)活性探针 Ub-Ub(OTULIN 活性探针[ABP]),该探针与 OTULIN 的催化位点结合,从而捕获 OTULIN 的活性构象。OTULIN ABP 对 OTULIN 具有高选择性,不会标记其他 M1 切割 DUB,包括 CYLD。唯一可检测的交叉反应性是 USP5(肽基水解酶 T)的标记和通过 Ub-激活 E1 酶的多 OTULIN ABP 链的 ATP 依赖性组装。这两种交叉反应性都被 ABP 近端 Ub 中 C 末端甘氨酸的去除所消除,产生特异性 OTULIN 探针 Ub-Ub(OTULIN ABPΔG76)。下拉实验表明,结合底物的 OTULIN 与线性泛素链组装复合物(LUBAC)相关联。因此,我们提出了一种针对 OTULIN 的高度选择性 ABP,这将有助于研究这种必需 DUB 的细胞功能。