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蜘蛛新型精氨酸激酶的生化与结构特征

Biochemical and structural characterization of a novel arginine kinase from the spider .

作者信息

Laino Aldana, Lopez-Zavala Alonso A, Garcia-Orozco Karina D, Carrasco-Miranda Jesus S, Santana Marianela, Stojanoff Vivian, Sotelo-Mundo Rogerio R, Garcia Carlos Fernando

机构信息

Instituto de Investigaciones Bioquímicas de La Plata "Dr. Prof. Rodolfo R. Brenner", Universidad Nacional de La Plata, La Plata, Buenos Aires, Argentina.

Departamento de Ciencias Químico-Biológicas, Universidad de Sonora, Hermosillo, Sonora, Mexico.

出版信息

PeerJ. 2017 Sep 11;5:e3787. doi: 10.7717/peerj.3787. eCollection 2017.

Abstract

Energy buffering systems are key for homeostasis during variations in energy supply. Spiders are the most important predators for insects and therefore key in terrestrial ecosystems. From biomedical interest, spiders are important for their venoms and as a source of potent allergens, such as arginine kinase (AK, EC 2.7.3.3). AK is an enzyme crucial for energy metabolism, keeping the pool of phosphagens in invertebrates, and also an allergen for humans. In this work, we studied AK from the Argentininan spider (AK), from its complementary DNA to the crystal structure. The AK cDNA from muscle was cloned, and it is comprised of 1068 nucleotides that encode a 384-amino acids protein, similar to other invertebrate AKs. The apparent Michaelis-Menten kinetic constant ( ) was 1.7 mM with a of 75 s. Two crystal structures are presented, the apoAK and AK bound to arginine, both in the conformation with the active site lid (residues 310-320) completely disordered. The guanidino group binding site in the apo structure appears to be organized to accept the arginine substrate. Finally, these results contribute to knowledge of mechanistic details of the function of arginine kinase.

摘要

能量缓冲系统对于能量供应变化期间的体内平衡至关重要。蜘蛛是昆虫最重要的捕食者,因此是陆地生态系统中的关键物种。从生物医学角度来看,蜘蛛因其毒液以及作为强效过敏原(如精氨酸激酶,AK,EC 2.7.3.3)的来源而具有重要意义。AK是一种对能量代谢至关重要的酶,维持无脊椎动物中的磷酸原库,同时也是人类的过敏原。在这项工作中,我们研究了来自阿根廷蜘蛛的AK,从其互补DNA到晶体结构。克隆了肌肉中的AK cDNA,它由1068个核苷酸组成,编码一个384个氨基酸的蛋白质,与其他无脊椎动物的AK相似。表观米氏动力学常数( )为1.7 mM, 为75 s。给出了两种晶体结构,脱辅基AK和与精氨酸结合的AK,两者均处于 构象,活性位点盖子(残基310 - 320)完全无序。脱辅基结构中的胍基结合位点似乎已组织好以接受精氨酸底物。最后,这些结果有助于了解精氨酸激酶功能的机制细节。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2fd5/5598448/33e88dc22a82/peerj-05-3787-g001.jpg

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