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藜麦蛋白-卡拉胶相互作用影响因素的实验与分子模拟研究

A combined experimental and molecular simulation study of factors influencing interaction of quinoa proteins-carrageenan.

机构信息

Universidad Nacional de Rosario-CONICET, Facultad de Ciencias Bioquímicas y Farmacéuticas, Área Fisicoquímica, Argentina.

Universidad Nacional de Rosario-CONICET, Facultad de Ciencias Bioquímicas y Farmacéuticas, Área Fisicoquímica, Argentina; Universidad Católica Argentina, Facultad Católica de Química e Ingeniería del Rosario, Argentina.

出版信息

Int J Biol Macromol. 2018 Feb;107(Pt A):949-956. doi: 10.1016/j.ijbiomac.2017.09.076. Epub 2017 Sep 21.

DOI:10.1016/j.ijbiomac.2017.09.076
PMID:28943441
Abstract

The interaction between quinoa proteins isolate (QP isolate) and the negatively charged polysaccharide ι-Carragennan (Carr) as a function of pH was studied. Experimental measurements as turbidity, hydrophobic surface, ζ-potential, and hydrodynamic size were carried out. Associative interaction between QP and Carr was found in the pH range between 1 and 2.9. When both molecules are negatively charged (pH>5,5), a pure Coulombic repulsion regime is observed and the self-association of QP due to the Carr exclusion is proposed. In the intermediate pH range, the experimental data suggests that the charge regulation mechanism can overcome the electrostatic repulsion that may take place (and an attraction between QP and Carr can still be observed). Computational simulations by means of free energy derivatives using the Monte Carlo method were carried out to better understand the interaction mechanism between QP and Carr. QP was modeled as a single protein using one of the major proteins, Chenopodin (Ch), and Carr was modeled as a negatively charged polyelectrolyte (NCP) chain, both in the cell model framework. Simulation results showed attractive interactions in agreement with the experimental data.

摘要

研究了藜麦蛋白分离物 (QP 分离物) 与带负电荷的多糖 ι-卡拉胶(Carr)之间的相互作用随 pH 值的变化。进行了浊度、疏水面、ζ-电位和水动力粒径等实验测量。在 pH 值为 1 至 2.9 之间发现了 QP 和 Carr 之间的缔合相互作用。当两种分子均带负电荷时(pH>5.5),观察到纯库仑排斥状态,并且由于 Carr 的排斥,QP 发生自缔合。在中间 pH 范围内,实验数据表明,电荷调节机制可以克服可能发生的静电排斥(仍然可以观察到 QP 和 Carr 之间的吸引力)。通过使用蒙特卡罗方法的自由能导数进行计算模拟,以更好地理解 QP 和 Carr 之间的相互作用机制。QP 被建模为单个蛋白质,使用主要蛋白质之一 Chenopodin (Ch),而 Carr 被建模为带负电荷的聚电解质 (NCP) 链,两者都在细胞模型框架中。模拟结果显示与实验数据一致的吸引力相互作用。

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