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基于有限元的机器学习方法,用于实时模拟压缩下乳房组织的力学行为。

A finite element-based machine learning approach for modeling the mechanical behavior of the breast tissues under compression in real-time.

机构信息

Intelligent Data Analysis Laboratory (IDAL), University of Valencia, Av. de la Universidad s/n, 46100 Burjassot (Valencia), Spain.

Centro de Investigación en Ingeniería Mecánica (CIIM), Departamento de Ingeniería Mecánica y de Materiales, Universitat Politècnica de València, Camino de Vera s/n, 46022 Valencia, Spain.

出版信息

Comput Biol Med. 2017 Nov 1;90:116-124. doi: 10.1016/j.compbiomed.2017.09.019. Epub 2017 Sep 28.

DOI:10.1016/j.compbiomed.2017.09.019
PMID:28982035
Abstract

This work presents a data-driven method to simulate, in real-time, the biomechanical behavior of the breast tissues in some image-guided interventions such as biopsies or radiotherapy dose delivery as well as to speed up multimodal registration algorithms. Ten real breasts were used for this work. Their deformation due to the displacement of two compression plates was simulated off-line using the finite element (FE) method. Three machine learning models were trained with the data from those simulations. Then, they were used to predict in real-time the deformation of the breast tissues during the compression. The models were a decision tree and two tree-based ensemble methods (extremely randomized trees and random forest). Two different experimental setups were designed to validate and study the performance of these models under different conditions. The mean 3D Euclidean distance between nodes predicted by the models and those extracted from the FE simulations was calculated to assess the performance of the models in the validation set. The experiments proved that extremely randomized trees performed better than the other two models. The mean error committed by the three models in the prediction of the nodal displacements was under 2 mm, a threshold usually set for clinical applications. The time needed for breast compression prediction is sufficiently short to allow its use in real-time (<0.2 s).

摘要

本文提出了一种数据驱动的方法,用于实时模拟某些图像引导介入(如活检或放射治疗剂量输送)中乳房组织的生物力学行为,并加速多模态配准算法。这项工作使用了十个真实的乳房。使用有限元(FE)方法离线模拟了由于两个压缩板的位移引起的乳房变形。使用来自这些模拟的数据训练了三个机器学习模型。然后,它们被用于实时预测在压缩过程中乳房组织的变形。这些模型是决策树和两种基于树的集成方法(极端随机树和随机森林)。设计了两种不同的实验设置来验证和研究这些模型在不同条件下的性能。为了评估模型在验证集上的性能,计算了模型预测的节点与从 FE 模拟中提取的节点之间的平均 3D 欧几里得距离。实验证明,极端随机树的性能优于其他两种模型。在预测节点位移方面,三个模型的平均误差都小于 2 毫米,这是通常用于临床应用的阈值。用于乳房压缩预测的时间足够短,可以实时使用(<0.2 秒)。

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