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含交替α-氨基酸和噻唑基γ-氨基酸的杂合肽中的带状结构

C Ribbon-Like Structures in Hybrid Peptides Alternating α- and Thiazole-Based γ-Amino Acids.

作者信息

Bonnel Clément, Legrand Baptiste, Simon Matthieu, Martinez Jean, Bantignies Jean-Louis, Kang Young Kee, Wenger Emmanuel, Hoh Francois, Masurier Nicolas, Maillard Ludovic T

机构信息

Institut des Biomolécules Max Mousseron, UMR CNRS-UM-ENSCM 5247, UFR des Sciences Pharmaceutiques et Biologiques, 15 Avenue Charles Flahault, 34093, Montpellier Cedex 5, France.

LC2-UMR 5221 CNRS-UM, Montpellier, France.

出版信息

Chemistry. 2017 Dec 11;23(69):17584-17591. doi: 10.1002/chem.201704001. Epub 2017 Nov 15.

Abstract

According to their restricted conformational freedom, heterocyclic γ-amino acids are usually considered to be related to Z-vinylogous γ-amino acids. In this context, oligomers alternating α-amino acids and thiazole-based γ-amino acids (ATCs) were expected to fold into a canonical 12-helical shape as described for α/γ-hybrid peptides composed of cis-α/β-unsaturated γ-amino acids. However, through a combination of X-ray crystallography, NMR spectroscopy, FTIR experiments, and DFT calculations, it was determined that the folding behavior of ATC-containing hybrid peptides is much more complex. The homochiral α/(S)-ATC sequences were unable to adopt a stable conformation, whereas the heterochiral α/(R)-ATC peptides displayed novel ribbon structures stabilized by unusual C -bifurcated hydrogen bonds. These ribbon structures could be considered as a succession of pre-organized γ/α dipeptides and may provide the basis for designing original α-helix mimics.

摘要

根据其受限的构象自由度,杂环γ-氨基酸通常被认为与Z-乙烯型γ-氨基酸有关。在这种情况下,由α-氨基酸和噻唑基γ-氨基酸(ATC)交替组成的低聚物预计会折叠成如由顺式-α/β-不饱和γ-氨基酸组成的α/γ-杂合肽所描述的典型12螺旋形状。然而,通过X射线晶体学、核磁共振光谱、傅里叶变换红外光谱实验和密度泛函理论计算相结合,确定含ATC的杂合肽的折叠行为要复杂得多。同手性α/(S)-ATC序列无法形成稳定的构象,而异手性α/(R)-ATC肽则呈现出由不寻常的C-分叉氢键稳定的新型带状结构。这些带状结构可被视为一系列预组织的γ/α二肽,可能为设计原始的α-螺旋模拟物提供基础。

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