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本文引用的文献

1
An integrated proteomic and transcriptomic analysis of perivitelline fluid proteins in a freshwater gastropod laying aerial eggs.对产空气卵的淡水腹足类动物卵周液蛋白质进行的蛋白质组学和转录组学综合分析。
J Proteomics. 2017 Feb 23;155:22-30. doi: 10.1016/j.jprot.2017.01.006. Epub 2017 Jan 14.
2
Genetic Basis of Differential Heat Resistance between Two Species of Congeneric Freshwater Snails: Insights from Quantitative Proteomics and Base Substitution Rate Analysis.两种同属淡水蜗牛耐热性差异的遗传基础:来自定量蛋白质组学和碱基替换率分析的见解
J Proteome Res. 2015 Oct 2;14(10):4296-308. doi: 10.1021/acs.jproteome.5b00462. Epub 2015 Aug 28.
3
The major egg reserve protein from the invasive apple snail Pomacea maculata is a complex carotenoprotein related to those of Pomacea canaliculata and Pomacea scalaris.入侵性苹果螺 Pomacea maculata 的主要卵储备蛋白是一种与 Pomacea canaliculata 和 Pomacea scalaris 相关的复杂类胡萝卜素蛋白。
Comp Biochem Physiol B Biochem Mol Biol. 2014 Mar;169:63-71. doi: 10.1016/j.cbpb.2013.11.008. Epub 2013 Nov 28.
4
Transcriptomic and iTRAQ proteomic approaches reveal novel short-term hyperosmotic stress responsive proteins in the gill of the Japanese eel (Anguilla japonica).转录组学和 iTRAQ 蛋白质组学方法揭示了日本鳗鲡(Anguilla japonica)鳃中新型短期高渗胁迫响应蛋白。
J Proteomics. 2013 Aug 26;89:81-94. doi: 10.1016/j.jprot.2013.05.026. Epub 2013 Jun 2.
5
De novo assembly of the transcriptome of an invasive snail and its multiple ecological applications.从头组装一种入侵蜗牛的转录组及其多种生态应用。
Mol Ecol Resour. 2012 Nov;12(6):1133-44. doi: 10.1111/1755-0998.12014. Epub 2012 Sep 21.
6
First proteome of the egg perivitelline fluid of a freshwater gastropod with aerial oviposition.首例具有气生式产卵的淡水腹足纲软体动物卵黄前卵液的蛋白质组图谱。
J Proteome Res. 2012 Aug 3;11(8):4240-8. doi: 10.1021/pr3003613. Epub 2012 Jul 13.
7
Full-length transcriptome assembly from RNA-Seq data without a reference genome.无参考基因组的 RNA-Seq 数据的全长转录组组装。
Nat Biotechnol. 2011 May 15;29(7):644-52. doi: 10.1038/nbt.1883.

蜗牛卵中卵周液蛋白质的蛋白质组学和转录组学分析数据集。

Dataset for the proteomic and transcriptomic analyses of perivitelline fluid proteins in snail eggs.

作者信息

Mu Huawei, Sun Jin, Heras Horacio, Chu Ka Hou, Qiu Jian-Wen

机构信息

Department of Biology, Hong Kong Baptist University, Hong Kong, China.

Division of Life Science, Hong Kong University of Science and Technology, Hong Kong, China.

出版信息

Data Brief. 2017 Sep 22;15:203-207. doi: 10.1016/j.dib.2017.09.020. eCollection 2017 Dec.

DOI:10.1016/j.dib.2017.09.020
PMID:29021998
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5633349/
Abstract

This article describes how the proteomic and transcriptomic data were produced during a study of the reproductive proteins of , an aquatic apple snail laying colorful aerial eggs, and provides public access to the data. The data are related to a research article titled 'An integrated proteomic and transcriptomic analysis of perivitelline fluid proteins in a freshwater gastropod laying aerial eggs' (Mu et al., 2017) [1]. RNA was extracted from the albumen gland and other tissues and sequenced on an Illumina Hiseq. 2000. The assembled transcriptome was translated into protein sequences and then used for protein identification. Proteins from the perivitelline fluid of were separated in SDS-PAGE and analyzed by LTQ-Orbitrap Elite coupled to an Easy-nLC. The translated transcriptome data are provided in this article. Proteomic data (. file format) are available via ProteomeXchange with the identifier PXD006718.

摘要

本文描述了在对一种产下彩色气生卵的水生苹果螺的生殖蛋白进行研究期间,蛋白质组学和转录组学数据是如何产生的,并提供了数据的公共访问途径。这些数据与一篇题为《对产气生卵的淡水腹足动物卵周液蛋白的蛋白质组学和转录组学综合分析》的研究文章相关(Mu等人,2017年)[1]。从蛋白腺和其他组织中提取RNA,并在Illumina Hiseq. 2000上进行测序。组装好的转录组被翻译成蛋白质序列,然后用于蛋白质鉴定。该苹果螺卵周液中的蛋白质在SDS-PAGE中进行分离,并通过与Easy-nLC联用的LTQ-Orbitrap Elite进行分析。本文提供了翻译后的转录组数据。蛋白质组学数据(.文件格式)可通过蛋白质组交换库获得,标识符为PXD006718。