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转录表达可塑性作为玉米和水稻夜蛾菌株在物种形成过程中对替代幼虫寄主植物的反应。

Transcript expression plasticity as a response to alternative larval host plants in the speciation process of corn and rice strains of Spodoptera frugiperda.

机构信息

Laboratório de Melhoramento de Plantas, Centro de Energia Nuclear na Agricultura, Universidade de São Paulo, Campus "Luiz de Queiroz", Av. Centenário, 303, Piracicaba, SP, 13400-970, Brazil.

Present address: Centro de Biologia Molecular e Engenharia Genética, Universidade Estadual de Campinas, Av. Cândido Rondon, 400, Campinas, SP, 13083-875, Brazil.

出版信息

BMC Genomics. 2017 Oct 16;18(1):792. doi: 10.1186/s12864-017-4170-z.

Abstract

BACKGROUND

Our main purpose was to evaluate the expression of plastic and evolved genes involved in ecological speciation in the noctuid moth Spodoptera frugiperda, the fall armyworm (FAW); and to demonstrate how host plants might influence lineage differentiation in this polyphagous insect. FAW is an important pest of several crops worldwide, and it is differentiated into host plant-related strains, corn (CS) and rice strains (RS). RNA-Seq and transcriptome characterization were applied to evaluate unbiased genetic expression differences in larvae from the two strains, fed on primary (corn) and alternative (rice) host plants. We consider that genes that are differently regulated by the same FAW strain, as a response to different hosts, are "plastic". Otherwise, differences in gene expression between the two strains fed on the same host are considered constitutive differences.

RESULTS

Individual performance parameters (larval and pupal weight) varied among conditions (strains vs. hosts). A total of 3657 contigs was related to plastic response, and 2395 contigs were differentially regulated in the two strains feeding on preferential and alternative hosts (constitutive contigs). Three molecular functions were present in all comparisons, both down- and up-regulated: oxidoreductase activity, metal-ion binding, and hydrolase activity.

CONCLUSIONS

Metabolization of foreign chemicals is among the key functions involved in the phenotypic variation of FAW strains. From an agricultural perspective, high plasticity in families of detoxifying genes indicates the capacity for a rapid response to control compounds such as insecticides.

摘要

背景

我们的主要目的是评估参与生态物种形成的可塑性和进化基因在夜蛾 Spodoptera frugiperda 中的表达,即秋粘虫(FAW);并展示寄主植物如何影响这种多食性昆虫的谱系分化。FAW 是世界上几种作物的重要害虫,它分化为与寄主植物有关的玉米(CS)和水稻(RS)菌株。RNA-Seq 和转录组特征分析用于评估幼虫在两种菌株上的无偏基因表达差异,这两种菌株分别以玉米(CS)和水稻(RS)为食。我们认为,FAW 同一菌株对不同宿主的反应中差异调控的基因是“可塑性”的。否则,两种菌株在同一宿主上的基因表达差异被认为是组成型差异。

结果

个体表现参数(幼虫和蛹重)在条件(菌株与宿主)之间存在差异。共有 3657 个基因与可塑性反应有关,而在两种菌株分别以优先和替代宿主(组成型基因)为食时,有 2395 个基因表达不同。在所有比较中都存在三种分子功能,既有下调也有上调:氧化还原酶活性、金属离子结合和水解酶活性。

结论

代谢外来化学物质是 FAW 菌株表型变异所涉及的关键功能之一。从农业角度来看,解毒基因家族的高可塑性表明了对控制化合物(如杀虫剂)快速反应的能力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/46c4/5644112/30dc7bfa47fb/12864_2017_4170_Fig1_HTML.jpg

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