Munro Jacob E, Kimyon Önder, Rich Deborah J, Koenig Joanna, Tang Sihui, Low Adrian, Lee Matthew, Manefield Mike, Coleman Nicholas V
School of Life and Environmental Sciences, Building G08, University of Sydney, Darlington, NSW 2006, Australia.
School of Biotechnology and Biomolecular Sciences, University of New South Wales, Kensington, NSW 2033, Australia.
FEMS Microbiol Ecol. 2017 Nov 1;93(11). doi: 10.1093/femsec/fix133.
1,2-Dichloroethane (DCA) is a problematic groundwater pollutant. Factors influencing the distribution and activities of DCA-degrading bacteria are not well understood, which has hampered their application for bioremediation. Here, we used quantitative PCR to investigate the distribution of putative DCA-dehalogenating bacteria at a DCA-impacted site in Sydney (Australia). The dehalogenase genes dhlA, tceA and bvcA were detected in all groundwater samples (n = 15), while vcrA was found in 11/15 samples. The 16S rRNA gene sequences specific to the dehalogenating genera Dehalobacter, Desulfitobacterium and Dehalogenimonas were detected in 15/15, 13/15 and 13/15 samples, respectively, while Dehalococcoides sequences were found in 9/15 samples. The tceA, bvcA and vcrA genes occurred in the same samples as Dehalococcoides and Dehalobacter. Microcosm experiments confirmed the presence of bacteria capable of dechlorination under anoxic conditions. The abundance of the dhlA gene, which is found in hydrolytic DCA degraders, was positively correlated to the DCA concentration, and was unexpectedly most abundant in samples with low oxygen conditions. A dhlA-containing bacterium isolated from the site (Xanthobacter EL8) was capable of anaerobic growth on DCA under denitrifying conditions. The presence of diverse DCA-dehalogenating bacteria at this site indicates that natural attenuation or biostimulation could be valid approaches for site cleanup.
1,2 - 二氯乙烷(DCA)是一种有问题的地下水污染物。影响DCA降解细菌分布和活性的因素尚未得到充分了解,这阻碍了它们在生物修复中的应用。在此,我们使用定量PCR研究了澳大利亚悉尼一个受DCA污染场地中假定的DCA脱卤细菌的分布。在所有地下水样本(n = 15)中均检测到脱卤酶基因dhlA、tceA和bvcA,而在15个样本中的11个样本中发现了vcrA。分别在15/15、13/15和13/15的样本中检测到了脱卤属Dehalobacter、Desulfitobacterium和Dehalogenimonas的16S rRNA基因序列,而在15个样本中的9个样本中发现了Dehalococcoides序列。tceA、bvcA和vcrA基因与Dehalococcoides和Dehalobacter存在于相同样本中。微观世界实验证实了在缺氧条件下存在能够脱氯的细菌。在水解DCA降解菌中发现的dhlA基因丰度与DCA浓度呈正相关,并且出乎意料的是在低氧条件的样本中最为丰富。从该场地分离出的一株含dhlA的细菌(Xanthobacter EL8)能够在反硝化条件下以DCA为底物进行厌氧生长。该场地存在多种DCA脱卤细菌表明自然衰减或生物刺激可能是有效的场地清理方法。