Research Institute for Interdisciplinary Science, Okayama University, 3-1-1 Tsushima-Naka, Kita-ku, Okayama, 700-8530, Japan.
Department of Chemistry, Faculty of Science, Okayama University, 3-1-1 Tsushima-Naka, Kita-ku, Okayama, 700-8530, Japan.
Sci Rep. 2017 Oct 18;7(1):13489. doi: 10.1038/s41598-017-13661-0.
A chemomechanical-network model for myosin V is presented on the basis of both the nucleotide-dependent binding affinity of the head to an actin filament (AF) and asymmetries and similarity relations among the chemical transitions due to an intramolecular strain of the leading and trailing heads. The model allows for branched chemomechanical cycles and takes into account not only two different force-generating mechanical transitions between states wherein the leading head is strongly bound and the trailing head is weakly bound to the AF but also load-induced mechanical-slip transitions between states in which both heads are strongly bound. The latter is supported by the fact that ATP-independent high-speed backward stepping has been observed for myosin V, although such motility has never been for kinesin. The network model appears as follows: (1) the high chemomechanical-coupling ratio between forward step and ATP hydrolysis is achieved even at low ATP concentrations by the dual mechanical transitions; (2) the forward stepping at high ATP concentrations is explained by the front head-gating mechanism wherein the power stroke is triggered by the inorganic-phosphate (Pi) release from the leading head; (3) the ATP-binding or hydrolyzed ADP.Pi-binding leading head produces a stable binding to the AF, especially against backward loading.
提出了肌球蛋白 V 的化学机械网络模型,该模型基于头部与肌动蛋白丝(AF)的核苷酸依赖性结合亲和力,以及由于领先和落后头部的分子内应变而导致的化学转变之间的不对称性和相似性关系。该模型允许分支化学机械循环,不仅考虑了两种不同的力产生机械转变,即领先头部与 AF 强结合,而尾部头部与 AF 弱结合,还考虑了负载诱导的机械滑动转变,其中两个头部都与 AF 强结合。尽管这种运动从未在驱动蛋白中观察到,但事实上,ATP 非依赖性高速后退步已被观察到肌球蛋白 V,这支持了后一种转变。网络模型如下所示:(1)通过双重机械转变,即使在低 ATP 浓度下,也能实现向前步和 ATP 水解之间的高化学机械耦合比;(2)高 ATP 浓度下的向前步由前头部门控机制解释,其中无机磷(Pi)从领先头部释放触发动力冲程;(3)ATP 结合或水解 ADP.Pi 结合的领先头部与 AF 产生稳定结合,特别是抵抗后退加载。