Korasick David A, Wyatt Jesse W, Luo Min, Laciak Adrian R, Ruddraraju Kasi, Gates Kent S, Henzl Michael T, Tanner John J
Department of Biochemistry, University of Missouri , Columbia, Missouri 65211, United States.
Department of Chemistry, University of Missouri , Columbia, Missouri 65211, United States.
Biochemistry. 2017 Nov 7;56(44):5910-5919. doi: 10.1021/acs.biochem.7b00803.
Aldehyde dehydrogenase 7A1 (ALDH7A1) catalyzes the terminal step of lysine catabolism, the NAD-dependent oxidation of α-aminoadipate semialdehyde to α-aminoadipate. Structures of ALDH7A1 reveal the C-terminus is a gate that opens and closes in response to the binding of α-aminoadipate. In the closed state, the C-terminus of one protomer stabilizes the active site of the neighboring protomer in the dimer-of-dimers tetramer. Specifically, Ala505 and Gln506 interact with the conserved aldehyde anchor loop structure in the closed state. The apparent involvement of these residues in catalysis is significant because they are replaced by Pro505 and Lys506 in a genetic deletion (c.1512delG) that causes pyridoxine-dependent epilepsy. Inspired by the c.1512delG defect, we generated variant proteins harboring either A505P, Q506K, or both mutations (A505P/Q506K). Additionally, a C-terminal truncation mutant lacking the last eight residues was prepared. The catalytic behaviors of the variants were examined in steady-state kinetic assays, and their quaternary structures were examined by analytical ultracentrifugation. The mutant enzymes exhibit a profound kinetic defect characterized by markedly elevated Michaelis constants for α-aminoadipate semialdehyde, suggesting that the mutated residues are important for substrate binding. Furthermore, analyses of the in-solution oligomeric states revealed that the mutant enzymes are defective in tetramer formation. Overall, these results suggest that the C-terminus of ALDH7A1 is crucial for the maintenance of both the oligomeric state and the catalytic activity.
醛脱氢酶7A1(ALDH7A1)催化赖氨酸分解代谢的最后一步,即依赖NAD将α-氨基己二酸半醛氧化为α-氨基己二酸。ALDH7A1的结构显示其C末端是一个响应α-氨基己二酸结合而开闭的门。在关闭状态下,一个原体的C末端稳定了二聚体-二聚体四聚体中相邻原体的活性位点。具体而言,Ala505和Gln506在关闭状态下与保守的醛锚定环结构相互作用。这些残基在催化过程中的明显参与意义重大,因为在导致维生素B6依赖性癫痫的基因缺失(c.1512delG)中,它们被Pro505和Lys506取代。受c.1512delG缺陷的启发,我们构建了携带A505P、Q506K或两者突变(A505P/Q506K)的变体蛋白。此外,还制备了一个缺失最后八个残基的C末端截短突变体。在稳态动力学测定中检测了变体的催化行为,并通过分析超速离心法检测了它们的四级结构。突变酶表现出严重的动力学缺陷,其特征是α-氨基己二酸半醛的米氏常数显著升高,这表明突变的残基对底物结合很重要。此外,对溶液中寡聚状态的分析表明,突变酶在四聚体形成方面存在缺陷。总体而言,这些结果表明ALDH7A1的C末端对于维持寡聚状态和催化活性都至关重要。