Thorolfsdottir Rosa B, Sveinbjornsson Gardar, Sulem Patrick, Helgadottir Anna, Gretarsdottir Solveig, Benonisdottir Stefania, Magnusdottir Audur, Davidsson Olafur B, Rajamani Sridharan, Roden Dan M, Darbar Dawood, Pedersen Terje R, Sabatine Marc S, Jonsdottir Ingileif, Arnar David O, Thorsteinsdottir Unnur, Gudbjartsson Daniel F, Holm Hilma, Stefansson Kari
deCODE genetics/Amgen, Inc., Reykjavik, Iceland.
deCODE genetics/Amgen, Inc., Reykjavik, Iceland.
J Am Coll Cardiol. 2017 Oct 24;70(17):2157-2168. doi: 10.1016/j.jacc.2017.09.005.
Genome-wide association studies (GWAS) have yielded variants at >30 loci that associate with atrial fibrillation (AF), including rare coding mutations in the sarcomere genes MYH6 and MYL4.
The aim of this study was to search for novel AF associations and in doing so gain insights into the mechanisms whereby variants affect AF risk, using electrocardiogram (ECG) measurements.
The authors performed a GWAS of 14,255 AF cases and 374,939 controls, using whole-genome sequence data from the Icelandic population, and tested novel signals in 2,002 non-Icelandic cases and 12,324 controls. They then tested the AF variants for effect on cardiac electrical function by using measurements in 289,297 ECGs from 62,974 individuals.
The authors discovered 2 novel AF variants, the intergenic variant rs72700114, between the genes LINC01142 and METTL11B (risk allele frequency = 8.1%; odds ratio [OR]: 1.26; p = 3.1 × 10), and the missense variant p.Gly4098Ser in PLEC (frequency = 1.2%; OR: 1.55; p = 8.0 × 10), encoding plectin, a cytoskeletal cross-linking protein that contributes to integrity of cardiac tissue. The authors also confirmed 29 reported variants. p.Gly4098Ser in PLEC significantly affects various ECG measurements in the absence of AF. Other AF variants have diverse effects on the conduction system, ranging from none to extensive.
The discovery of a missense variant in PLEC affecting AF combined with recent discoveries of variants in the sarcomere genes MYH6 and MYL4 points to an important role of myocardial structure in the pathogenesis of the disease. The diverse associations between AF variants and ECG measurements suggest fundamentally different categories of mechanisms contributing to the development of AF.
全基因组关联研究(GWAS)已在超过30个基因座上发现了与心房颤动(AF)相关的变异,包括肌节基因MYH6和MYL4中的罕见编码突变。
本研究旨在寻找新的AF关联,并通过心电图(ECG)测量深入了解变异影响AF风险的机制。
作者利用冰岛人群的全基因组序列数据,对14255例AF病例和374939例对照进行了GWAS,并在2002例非冰岛病例和12324例对照中测试了新的信号。然后,他们通过对62974名个体的289297份心电图测量,测试了AF变异对心脏电功能的影响。
作者发现了2个新的AF变异,基因LINC01142和METTL11B之间的基因间变异rs72700114(风险等位基因频率=8.1%;比值比[OR]:1.26;p=3.1×10),以及PLEC中的错义变异p.Gly4098Ser(频率=1.2%;OR:1.55;p=8.0×10),该变异编码网蛋白,一种有助于心脏组织完整性的细胞骨架交联蛋白。作者还确认了29个已报道的变异。在无AF的情况下,PLEC中的p.Gly4098Ser显著影响各种心电图测量。其他AF变异对传导系统有不同影响,从无影响到广泛影响。
PLEC中影响AF的错义变异的发现,以及最近在肌节基因MYH6和MYL4中变异的发现,表明心肌结构在该疾病发病机制中起重要作用。AF变异与心电图测量之间的多种关联表明,导致AF发生的机制存在根本不同的类别。