Gao Shuaihua, Zhu Shaozhou, Huang Rong, Li Hongxia, Wang Hao, Zheng Guojun
State Key Laboratory of Chemical Resources Engineering, Beijing University of Chemical Technology, Beijing, People's Republic of China.
Department of Chemistry, University of California, Berkeley, Berkeley, California, USA.
Appl Environ Microbiol. 2017 Dec 15;84(1). doi: 10.1128/AEM.01780-17. Print 2018 Jan 1.
To produce promising biocatalysts, natural enzymes often need to be engineered to increase their catalytic performance. In this study, the enantioselectivity and thermostability of a (+)-γ-lactamase from as the catalyst in the kinetic resolution of Vince lactam (2-azabicyclo[2.2.1]hept-5-en-3-one) were improved. Enantiomerically pure (-)-Vince lactam is the key synthon in the synthesis of antiviral drugs, such as carbovir and abacavir, which are used to fight against HIV and hepatitis B virus. The work was initialized by using the combinatorial active-site saturation test strategy to engineer the enantioselectivity of the enzyme. The approach resulted in two mutants, Val54Ser and Val54Leu, which catalyzed the hydrolysis of Vince lactam to give (-)-Vince lactam, with 99.2% (enantiomeric ratio [E] > 200) enantiomeric excess (ee) and 99.5% ee (E > 200), respectively. To improve the thermostability of the enzyme, 11 residues with high temperature factors (B-factors) calculated by B-FITTER or high root mean square fluctuation (RMSF) values from the molecular dynamics simulation were selected. Six mutants with increased thermostability were obtained. Finally, the mutants generated with improved enantioselectivity and mutants evolved for enhanced thermostability were combined. Several variants showing (+)-selectivity (E value > 200) and improved thermostability were observed. These engineered enzymes are good candidates to serve as enantioselective catalysts for the preparation of enantiomerically pure Vince lactam. Enzymatic kinetic resolution of the racemic Vince lactam using (+)-γ-lactamase is the most often utilized means of resolving the enantiomers for the preparation of carbocyclic nucleoside compounds. The efficiency of the native enzymes could be improved by using protein engineering methods, such as directed evolution and rational design. In our study, two properties (enantioselectivity and thermostability) of a γ-lactamase identified from were tackled using a semirational design. The protein engineering was initialized by combinatorial active-site saturation test to improve the enantioselectivity. At the same time, two strategies were applied to identify mutation candidates to enhance the thermostability based on calculations from both a static (B-FITTER based on the crystal structure) and a dynamic (root mean square fluctuation [RMSF] values based on molecular dynamics simulations) way. After combining the mutants, we successfully obtained the final mutants showing better properties in both properties. The engineered (+)-lactamase could be a candidate for the preparation of (-)-Vince lactam.
为了制备有前景的生物催化剂,天然酶通常需要进行工程改造以提高其催化性能。在本研究中,来自[具体来源未提及]的一种(+)-γ-内酰胺酶在Vince内酰胺(2-氮杂双环[2.2.1]庚-5-烯-3-酮)的动力学拆分中作为催化剂,其对映选择性和热稳定性得到了改善。对映体纯的(-)-Vince内酰胺是合成抗病毒药物(如用于对抗HIV和乙型肝炎病毒的卡波韦和阿巴卡韦)的关键合成子。这项工作首先使用组合活性位点饱和测试策略来改造该酶的对映选择性。该方法产生了两个突变体,Val54Ser和Val54Leu,它们催化Vince内酰胺水解生成(-)-Vince内酰胺,对映体过量(ee)分别为99.2%(对映体比例[E]>200)和99.5% ee(E>200)。为了提高该酶的热稳定性,选择了11个通过B-FITTER计算具有高温因子(B因子)或分子动力学模拟中具有高均方根波动(RMSF)值的残基。获得了六个热稳定性提高的突变体。最后,将对映选择性提高的突变体与热稳定性增强的突变体进行组合。观察到几个表现出(+)-选择性(E值>200)和热稳定性提高的变体。这些工程改造的酶是制备对映体纯Vince内酰胺的对映选择性催化剂的良好候选者。使用(+)-γ-内酰胺酶对外消旋Vince内酰胺进行酶促动力学拆分是制备碳环核苷化合物对映体最常用的方法。通过蛋白质工程方法(如定向进化和理性设计)可以提高天然酶的效率。在我们的研究中,使用半理性设计解决了从[具体来源未提及]鉴定出的一种γ-内酰胺酶的两个特性(对映选择性和热稳定性)。通过组合活性位点饱和测试启动蛋白质工程以提高对映选择性。同时,基于静态(基于晶体结构的B-FITTER)和动态(基于分子动力学模拟的均方根波动[RMSF]值)计算应用了两种策略来鉴定增强热稳定性的突变候选物。在组合突变体后,我们成功获得了在两种特性上都表现出更好性能的最终突变体。工程改造的(+)-内酰胺酶可能是制备(-)-Vince内酰胺的候选物。