Kancherla Reddy Prakash, Durling Mikael Brandström, Stenlid Jan, Högberg Nils
Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Data Brief. 2017 Sep 25;15:496-500. doi: 10.1016/j.dib.2017.09.043. eCollection 2017 Dec.
Basidiomycete brown-rot fungi have a huge importance for wood decomposition and thus the global carbon cycle. Here, we present the genome sequence of GR9-4 which represent different clade than the previously sequenced North American isolate FP-58527 SS1. The genome was sequenced by using a paired-end sequence library of Illumina and a 2.5k and 5k mate-pair library (ABI SOLiD). The final assembly adds up to a size of 45 Mb (including gaps between contigs), with a GC-content of 56%. The gene prediction resulted in 13,888 gene models. The genome sequence will be used as a basis for understanding population genomics, genome-wide association studies and wood decay mechanisms of this brown-rot fungus.
担子菌褐腐真菌对木材分解以及全球碳循环具有极其重要的意义。在此,我们展示了GR9 - 4的基因组序列,它与先前测序的北美分离株FP - 58527 SS1属于不同的进化枝。该基因组通过使用Illumina的双末端序列文库以及2.5k和5k的配对末端文库(ABI SOLiD)进行测序。最终组装结果的大小为45 Mb(包括重叠群之间的间隙),GC含量为56%。基因预测产生了13,888个基因模型。该基因组序列将作为理解这种褐腐真菌的群体基因组学、全基因组关联研究以及木材腐朽机制的基础。