Suppr超能文献

褐腐真菌GR9-4的基因组草图。

Draft genome of the brown-rot fungus GR9-4.

作者信息

Kancherla Reddy Prakash, Durling Mikael Brandström, Stenlid Jan, Högberg Nils

机构信息

Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Uppsala, Sweden.

出版信息

Data Brief. 2017 Sep 25;15:496-500. doi: 10.1016/j.dib.2017.09.043. eCollection 2017 Dec.

Abstract

Basidiomycete brown-rot fungi have a huge importance for wood decomposition and thus the global carbon cycle. Here, we present the genome sequence of GR9-4 which represent different clade than the previously sequenced North American isolate FP-58527 SS1. The genome was sequenced by using a paired-end sequence library of Illumina and a 2.5k and 5k mate-pair library (ABI SOLiD). The final assembly adds up to a size of 45 Mb (including gaps between contigs), with a GC-content of 56%. The gene prediction resulted in 13,888 gene models. The genome sequence will be used as a basis for understanding population genomics, genome-wide association studies and wood decay mechanisms of this brown-rot fungus.

摘要

担子菌褐腐真菌对木材分解以及全球碳循环具有极其重要的意义。在此,我们展示了GR9 - 4的基因组序列,它与先前测序的北美分离株FP - 58527 SS1属于不同的进化枝。该基因组通过使用Illumina的双末端序列文库以及2.5k和5k的配对末端文库(ABI SOLiD)进行测序。最终组装结果的大小为45 Mb(包括重叠群之间的间隙),GC含量为56%。基因预测产生了13,888个基因模型。该基因组序列将作为理解这种褐腐真菌的群体基因组学、全基因组关联研究以及木材腐朽机制的基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2682/5647465/c1a5a1c6a7ec/gr1.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验