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细菌中C-P键的全细胞检测

Whole-Cell Detection of C-P Bonds in Bacteria.

作者信息

Bartlett Christopher, Bansal Sonal, Burnett Alysha, Suits Michael D, Schaefer Jacob, Cegelski Lynette, Horsman Geoff P, Weadge Joel T

机构信息

Department of Chemistry, Washington University , St. Louis, Missouri 63130, United States.

Department of Chemistry, Stanford University , Stanford, California 94305, United States.

出版信息

Biochemistry. 2017 Nov 7;56(44):5870-5873. doi: 10.1021/acs.biochem.7b00814.

DOI:10.1021/acs.biochem.7b00814
PMID:29068202
Abstract

Naturally produced molecules possessing a C-P bond, such as phosphonates and phosphinates, remain vastly underexplored. Although success stories like fosfomycin have reinvigorated small molecule phosphonate discovery efforts, bioinformatic analyses predict an enormous unexplored biological reservoir of C-P bond-containing molecules, including those attached to complex macromolecules. However, high polarity, a lack of chromophores, and complex macromolecular association impede phosphonate discovery and characterization. Here we detect widespread transcriptional activation of phosphonate biosynthetic machinery across diverse bacterial phyla and describe the use of solid-state nuclear magnetic resonance to detect C-P bonds in whole cells of representative Gram-negative and Gram-positive bacterial species. These results suggest that phosphonate tailoring is more prevalent than previously recognized and set the stage for elucidating the fascinating chemistry and biology of these modifications.

摘要

天然产生的含有碳 - 磷(C-P)键的分子,如膦酸盐和次膦酸盐,仍未得到充分研究。尽管像磷霉素这样的成功案例重新激发了小分子膦酸盐的发现工作,但生物信息学分析预测,含C-P键分子的巨大生物库尚未被探索,包括那些与复杂大分子相连的分子。然而,高极性、缺乏发色团以及复杂的大分子缔合阻碍了膦酸盐的发现和表征。在这里,我们检测到不同细菌门类中膦酸盐生物合成机制的广泛转录激活,并描述了使用固态核磁共振来检测代表性革兰氏阴性和革兰氏阳性细菌物种全细胞中的C-P键。这些结果表明,膦酸盐修饰比以前认为的更为普遍,并为阐明这些修饰引人入胜的化学和生物学特性奠定了基础。

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Whole-Cell Detection of C-P Bonds in Bacteria.细菌中C-P键的全细胞检测
Biochemistry. 2017 Nov 7;56(44):5870-5873. doi: 10.1021/acs.biochem.7b00814.
2
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Genomic context analysis enables the discovery of an unusual NAD-dependent racemase in phosphonate catabolism.基因组背景分析有助于发现膦酸盐分解代谢中一种不同寻常的NAD依赖性消旋酶。
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Peculiar Phosphonate Modifications of Velvet Worm Slime Revealed by Advanced Nuclear Magnetic Resonance and Mass Spectrometry.高级核磁共振和质谱揭示的天蚕黏液中奇异的膦酸酯修饰。
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An inventory of early branch points in microbial phosphonate biosynthesis.
微生物膦酸盐生物合成早期分支点的清单。
Microb Genom. 2022 Feb;8(2). doi: 10.1099/mgen.0.000781.
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Discovery of a New, Recurrent Enzyme in Bacterial Phosphonate Degradation: ()-1-Hydroxy-2-aminoethylphosphonate Ammonia-lyase.发现细菌膦酸盐降解中的一种新的、反复出现的酶:()-1-羟基-2-氨基乙基膦酸盐氨裂解酶。
Biochemistry. 2021 Apr 20;60(15):1214-1225. doi: 10.1021/acs.biochem.1c00092. Epub 2021 Apr 8.
5
The predominance of nucleotidyl activation in bacterial phosphonate biosynthesis.核苷酸在细菌膦酸生物合成中的优势。
Nat Commun. 2019 Aug 16;10(1):3698. doi: 10.1038/s41467-019-11627-6.