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真核生物基因组中的 N-腺嘌呤 DNA 甲基化解析:从生物学到病理学。

N-adenine DNA methylation demystified in eukaryotic genome: From biology to pathology.

机构信息

Department of Biochemistry, Panjab University, Chandigarh, 160014, India.

Laboratory of Epigenetics and Diseases, Department of Pharmacology and Toxicology, National Institute of Pharmaceutical Education and Research, S.A.S. Nagar (Mohali), Punjab, 160062, India.

出版信息

Biochimie. 2018 Jan;144:56-62. doi: 10.1016/j.biochi.2017.10.014. Epub 2017 Oct 24.

Abstract

N-methyl-2'-deoxyadenosine (m6dA) is a well characterized DNA modification in prokaryotes. Its existence in eukaryotic DNA remained doubtful until recently. Evidence suggests that the m6dA levels decrease with the increasing complexity of eukaryotic genomes. Analysis of m6dA levels in genome of lower eukaryotes reveals its role in gene regulation, nucleosome positioning and early development. In higher eukaryotes m6dA is enriched in nongenic region compared to genic region, preferentially in chromosome X and 13 suggesting a chromosome bias. High levels of m6dA during embryogenesis as compared to adult tissues are indicative of its importance during development and possible association with regeneration capabilities. Further, decreased levels of m6dA in diabetic patients has been correlated with expression of Fat mass and obesity-associated (FTO) which acts as m6A demethylase. m6dA levels have also been reported to be decreased in different types of cancers. The present review highlights the role of m6dA modification in eukaryotic genomes and its functional importance in regulation of physiological and pathological processes.

摘要

N-甲基-2'-脱氧腺苷(m6dA)是原核生物中一种特征明确的 DNA 修饰。直到最近,它在真核生物 DNA 中的存在仍存在疑问。有证据表明,m6dA 水平随着真核生物基因组复杂性的增加而降低。对较低等真核生物基因组中 m6dA 水平的分析表明,它在基因调控、核小体定位和早期发育中发挥作用。在高等真核生物中,与基因区域相比,m6dA 在非基因区域富集,优先在 X 染色体和 13 号染色体上富集,表明存在染色体偏向性。与成人组织相比,胚胎发生过程中 m6dA 水平较高,表明其在发育过程中的重要性以及可能与再生能力有关。此外,糖尿病患者中 m6dA 水平降低与作为 m6A 去甲基酶的肥胖相关脂肪量和肥胖相关(FTO)的表达相关。据报道,不同类型的癌症中 m6dA 水平也降低。本综述强调了 m6dA 修饰在真核生物基因组中的作用及其在调节生理和病理过程中的功能重要性。

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