Department 7.2 Cryophysics and Spectrometry, Physikalisch-Technische Bundesanstalt, Abbestr. 2-12, 10587, Berlin, Germany.
Division of Molecular Biotechnology and Functional Genomics, Technical University of Applied Sciences, Hochschulring 1, 15745, Wildau, Germany.
Anal Bioanal Chem. 2017 Nov;409(29):6907-6923. doi: 10.1007/s00216-017-0655-5. Epub 2017 Oct 28.
Leishmania species are protozoan parasites and the causative agents of leishmaniasis, a vector borne disease that imposes a large health burden on individuals living mainly in tropical and subtropical regions. Different Leishmania species are responsible for the distinct clinical patterns, such as cutaneous, mucocutaneous, and visceral leishmaniasis, with the latter being potentially fatal if left untreated. For this reason, it is important to perform correct species identification and differentiation. Fourier transform infrared spectroscopy (FTIR) is an analytical spectroscopic technique increasingly being used as a potential tool for identification of microorganisms for diagnostic purposes. By employing mid-infrared (MIR) spectral data, it is not only possible to assess the chemical structures but also to achieve differentiation supported by multivariate statistic analysis. This work comprises a pilot study on differentiation of Leishmania species of the Old World (L. major, L. tropica, L. infantum, and L. donovani) as well as hybrids of distinct species by using vibrational spectroscopic fingerprints. Films of intact Leishmania parasites and their deoxyribonucleic acid (DNA) were characterized comparatively with respect to their biochemical nature and MIR spectral patterns. The strains' hyperspectral datasets were multivariately examined by means of variance-based principal components analysis (PCA) and distance-based hierarchical cluster analysis (HCA). With the implementation of MIR spectral datasets we show that a phenotypic differentiation of Leishmania at species and intra-species level is feasible. Thus, FTIR spectroscopy can be further exploited for building up spectral databases of Leishmania parasites in view of high-throughput analysis of clinical specimens. Graphical abstract For Leishmania species discrimination, sample films of intact parasites and their extracted DNA were analyzed by FTIR micro-spectroscopy. Hyperspectral datasets that comprise mid-infrared fingerprints were submitted to multivariate analysis tools such as principal components analysis (PCA) and hierarchical cluster analysis (HCA).
利什曼原虫属是原生动物寄生虫,也是利什曼病的病原体,这是一种由媒介传播的疾病,主要对生活在热带和亚热带地区的个人造成沉重的健康负担。不同的利什曼原虫属导致不同的临床模式,如皮肤利什曼病、黏膜皮肤利什曼病和内脏利什曼病,如果不治疗,后者可能致命。因此,正确鉴定和区分物种非常重要。傅里叶变换红外光谱(FTIR)是一种分析光谱技术,越来越多地被用作微生物鉴定的潜在工具,用于诊断目的。通过使用中红外(MIR)光谱数据,不仅可以评估化学结构,还可以通过多元统计分析实现支持的区分。这项工作是对旧世界(L. major、L. tropica、L. infantum 和 L. donovani)利什曼原虫物种以及不同物种杂种的区分进行的初步研究,使用振动光谱指纹进行区分。完整利什曼原虫寄生虫及其脱氧核糖核酸(DNA)的薄膜在生化性质和 MIR 光谱模式方面进行了比较表征。使用基于方差的主成分分析(PCA)和基于距离的层次聚类分析(HCA)对菌株的高光谱数据集进行了多元分析。通过实施 MIR 光谱数据集,我们表明在物种和种内水平上对利什曼原虫进行表型区分是可行的。因此,FTIR 光谱学可以进一步用于构建利什曼原虫寄生虫的光谱数据库,以便对临床标本进行高通量分析。