• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

耐辐射球菌海藻糖合酶的N253F突变体结构揭示了一种开放的活性位点拓扑结构。

The N253F mutant structure of trehalose synthase from Deinococcus radiodurans reveals an open active-site topology.

作者信息

Chow Sih Yao, Wang Yung Lin, Hsieh Yu Chiao, Lee Guan Chiun, Liaw Shwu Huey

机构信息

Department of Life Sciences and Institute of Genome Sciences, National Yang-Ming University, No. 155, Sec. 2, Linong Street, Taipei 11221, Taiwan.

Department of Life Science, National Taiwan Normal University, No. 162, Sec. 1, Heping East Road, Taipei 11677, Taiwan.

出版信息

Acta Crystallogr F Struct Biol Commun. 2017 Nov 1;73(Pt 11):588-594. doi: 10.1107/S2053230X17014303. Epub 2017 Oct 20.

DOI:10.1107/S2053230X17014303
PMID:29095151
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5683027/
Abstract

Trehalose synthase (TS) catalyzes the reversible conversion of maltose to trehalose and belongs to glycoside hydrolase family 13 (GH13). Previous mechanistic analysis suggested a rate-limiting protein conformational change, which is probably the opening and closing of the active site. Consistently, crystal structures of Deinococcus radiodurans TS (DrTS) in complex with the inhibitor Tris displayed an enclosed active site for catalysis of the intramoleular isomerization. In this study, the apo structure of the DrTS N253F mutant displays a new open conformation with an empty active site. Analysis of these structures suggests that substrate binding induces a domain rotation to close the active site. Such a substrate-induced domain rotation has also been observed in some other GH13 enzymes.

摘要

海藻糖合酶(TS)催化麦芽糖向海藻糖的可逆转化,属于糖苷水解酶家族13(GH13)。先前的机理分析表明存在限速蛋白构象变化,这可能是活性位点的打开和关闭。一致地,与抑制剂Tris复合的耐辐射球菌TS(DrTS)的晶体结构显示出用于催化分子内异构化的封闭活性位点。在本研究中,DrTS N253F突变体的无配体结构显示出具有空活性位点的新开放构象。对这些结构的分析表明,底物结合会诱导结构域旋转以关闭活性位点。在其他一些GH13酶中也观察到了这种底物诱导的结构域旋转。

相似文献

1
The N253F mutant structure of trehalose synthase from Deinococcus radiodurans reveals an open active-site topology.耐辐射球菌海藻糖合酶的N253F突变体结构揭示了一种开放的活性位点拓扑结构。
Acta Crystallogr F Struct Biol Commun. 2017 Nov 1;73(Pt 11):588-594. doi: 10.1107/S2053230X17014303. Epub 2017 Oct 20.
2
Structures of trehalose synthase from Deinococcus radiodurans reveal that a closed conformation is involved in catalysis of the intramolecular isomerization.耐辐射球菌海藻糖合酶的结构表明,一种封闭构象参与了分子内异构化的催化过程。
Acta Crystallogr D Biol Crystallogr. 2014 Dec 1;70(Pt 12):3144-54. doi: 10.1107/S1399004714022500. Epub 2014 Nov 22.
3
The structure of amylosucrase from Deinococcus radiodurans has an unusual open active-site topology.来自耐辐射球菌的淀粉蔗糖酶结构具有异常的开放活性位点拓扑结构。
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Sep;69(Pt 9):973-8. doi: 10.1107/S1744309113021714. Epub 2013 Aug 19.
4
Structural and Mutational Analyses of Trehalose Synthase from Reveal the Interconversion of Maltose-Trehalose Mechanism.从 中提取的海藻糖合酶的结构和突变分析揭示了麦芽糖-海藻糖机制的相互转换。
J Agric Food Chem. 2024 Aug 21;72(33):18649-18657. doi: 10.1021/acs.jafc.4c03661. Epub 2024 Aug 7.
5
Crystal structure of maltooligosyltrehalose trehalohydrolase from Deinococcus radiodurans in complex with disaccharides.来自耐辐射球菌的麦芽寡糖基海藻糖海藻糖水解酶与二糖复合物的晶体结构
J Mol Biol. 2005 Apr 15;347(5):949-63. doi: 10.1016/j.jmb.2005.02.011.
6
Role of the C-terminal domain of Thermus thermophilus trehalose synthase in the thermophilicity, thermostability, and efficient production of trehalose.嗜热栖热菌海藻糖合酶C末端结构域在嗜热性、热稳定性及海藻糖高效生产中的作用
J Agric Food Chem. 2007 May 2;55(9):3435-43. doi: 10.1021/jf070181p. Epub 2007 Mar 30.
7
Computational and Enzymatic Analyses Unveil the Catalytic Mechanism of Thermostable Trehalose Synthase and Suggest Strategies for Improved Bioconversion.计算与酶学分析揭示耐热海藻糖合酶的催化机制,并为提高生物转化效率提供策略。
J Agric Food Chem. 2019 Jul 24;67(29):8177-8185. doi: 10.1021/acs.jafc.9b01848. Epub 2019 Jul 10.
8
Structural Characteristics and Function of a New Kind of Thermostable Trehalose Synthase from Thermobaculum terrenum.来自陆地嗜热芽孢杆菌的一种新型耐热海藻糖合酶的结构特征与功能
J Agric Food Chem. 2017 Sep 6;65(35):7726-7735. doi: 10.1021/acs.jafc.7b02732. Epub 2017 Aug 23.
9
The structure of the Mycobacterium smegmatis trehalose synthase reveals an unusual active site configuration and acarbose-binding mode.耻垢分枝杆菌海藻糖合酶的结构揭示了一种不寻常的活性位点构象和阿卡波糖结合模式。
Glycobiology. 2013 Sep;23(9):1075-83. doi: 10.1093/glycob/cwt044. Epub 2013 Jun 4.
10
Mechanistic analysis of trehalose synthase from Mycobacterium smegmatis.来自耻垢分枝杆菌的海藻糖合酶的机制分析。
J Biol Chem. 2011 Oct 14;286(41):35601-35609. doi: 10.1074/jbc.M111.280362. Epub 2011 Aug 12.

引用本文的文献

1
Structural and Mutational Analyses of Trehalose Synthase from Reveal the Interconversion of Maltose-Trehalose Mechanism.从 中提取的海藻糖合酶的结构和突变分析揭示了麦芽糖-海藻糖机制的相互转换。
J Agric Food Chem. 2024 Aug 21;72(33):18649-18657. doi: 10.1021/acs.jafc.4c03661. Epub 2024 Aug 7.

本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
Purification and Characterization of a Thermostable Trehalose Synthase from Thermus aquaticus.嗜热水栖热菌中一种耐热海藻糖合酶的纯化与特性分析
Biosci Biotechnol Biochem. 1996 Jan;60(5):835-9. doi: 10.1271/bbb.60.835.
3
Structural analysis of the α-glucosidase HaG provides new insights into substrate specificity and catalytic mechanism.α-葡萄糖苷酶HaG的结构分析为底物特异性和催化机制提供了新的见解。
Acta Crystallogr D Biol Crystallogr. 2015 Jun;71(Pt 6):1382-91. doi: 10.1107/S139900471500721X. Epub 2015 May 23.
4
Structures of trehalose synthase from Deinococcus radiodurans reveal that a closed conformation is involved in catalysis of the intramolecular isomerization.耐辐射球菌海藻糖合酶的结构表明,一种封闭构象参与了分子内异构化的催化过程。
Acta Crystallogr D Biol Crystallogr. 2014 Dec 1;70(Pt 12):3144-54. doi: 10.1107/S1399004714022500. Epub 2014 Nov 22.
5
The structure of amylosucrase from Deinococcus radiodurans has an unusual open active-site topology.来自耐辐射球菌的淀粉蔗糖酶结构具有异常的开放活性位点拓扑结构。
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Sep;69(Pt 9):973-8. doi: 10.1107/S1744309113021714. Epub 2013 Aug 19.
6
Synthesis of α-glucan in mycobacteria involves a hetero-octameric complex of trehalose synthase TreS and Maltokinase Pep2.分枝杆菌中α-葡聚糖的合成涉及海藻糖合酶 TreS 和麦芽糖激酶 Pep2 的异八聚体复合物。
ACS Chem Biol. 2013 Oct 18;8(10):2245-55. doi: 10.1021/cb400508k. Epub 2013 Aug 13.
7
The structure of the Mycobacterium smegmatis trehalose synthase reveals an unusual active site configuration and acarbose-binding mode.耻垢分枝杆菌海藻糖合酶的结构揭示了一种不寻常的活性位点构象和阿卡波糖结合模式。
Glycobiology. 2013 Sep;23(9):1075-83. doi: 10.1093/glycob/cwt044. Epub 2013 Jun 4.
8
Mutations inducing an active-site aperture in Rhizobium sp. sucrose isomerase confer hydrolytic activity.根瘤菌蔗糖异构酶中诱导活性位点孔径的突变赋予水解活性。
Acta Crystallogr D Biol Crystallogr. 2013 Feb;69(Pt 2):298-307. doi: 10.1107/S0907444912045532. Epub 2013 Jan 19.
9
Applying pairwise combinations of amino acid mutations for sorting out highly efficient glucosylation tools for chemo-enzymatic synthesis of bacterial oligosaccharides.应用氨基酸突变的两两组合,筛选出用于细菌低聚糖化学酶法合成的高效糖化工具。
J Am Chem Soc. 2012 Nov 14;134(45):18677-88. doi: 10.1021/ja306845b. Epub 2012 Oct 30.
10
Properties of recombinant trehalose synthase from Deinococcus radiodurans expressed in Escherichia coli.在大肠杆菌中表达的来自耐辐射球菌的重组海藻糖合酶的性质
Acta Biochim Pol. 2012;59(3):425-31. Epub 2012 Sep 18.