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外显子组测序确定LOXL2突变是家族性颅内动脉瘤的一个病因。

Exome Sequencing Identifies LOXL2 Mutation as a Cause of Familial Intracranial Aneurysm.

作者信息

Wu YaQiu, Li Zhili, Shi Yi, Chen Longyi, Tan Haibin, Wang Zhenyu, Yin Cheng, Liu Ling, Hu Junting

机构信息

Department of Neurosurgery, Sichuan Academy of Medical Sciences & Sichuan Provincial People's Hospital, Chengdu, Sichuan, China.

Department of Neurosurgery, Sichuan Academy of Medical Sciences & Sichuan Provincial People's Hospital, Chengdu, Sichuan, China.

出版信息

World Neurosurg. 2018 Jan;109:e812-e818. doi: 10.1016/j.wneu.2017.10.094. Epub 2017 Oct 26.

Abstract

BACKGROUND

Genetic risk factors can contribute to the etiology of intracranial aneurysms (IAs), and the genetic predisposition of IAs is largely unknown. Our study aimed to explore the role of rare variations in IA susceptibility.

METHODS

Whole-exome sequencing (WES) was performed in a representative family with a history of multiple cases of IAs. WES variants were prioritized by various filtering strategies, including frequency, predicted pathogenicity, and functional prediction. Sanger sequencing also was performed in an additional 2 families and sporadic IA cases.

RESULTS

After WES and filtering, 15 single-nucleotide variants and 3 insertion/deletions (indels) were prioritized in the family. Among them, we selected 5 candidate variants (located in DHRS3, OR2G3, LOXL2, FGL1, and KLC3) by considering known disease genes or ontology association with cardiovascular morphogenesis or other known diseases. Genotyping results revealed that only c.C133T/p.H45Y in exon 2 of LOXL2 gene was segregated fully with definite IA phenotypes in the family. Moreover, LOXL2 has been reported as a susceptibility gene for IAs.

CONCLUSIONS

LOXL2 c.C133T is a pathogenic mutation that is responsible for a fraction of familial IAs.

摘要

背景

遗传风险因素可导致颅内动脉瘤(IA)的病因,而IA的遗传易感性在很大程度上尚不清楚。我们的研究旨在探讨罕见变异在IA易感性中的作用。

方法

对一个有多个IA病例家族史的代表性家族进行全外显子组测序(WES)。通过各种过滤策略对WES变异进行优先级排序,包括频率、预测的致病性和功能预测。还对另外2个家族和散发IA病例进行了桑格测序。

结果

经过WES和过滤后,在该家族中确定了15个单核苷酸变异和3个插入/缺失(indel)。其中,我们通过考虑已知疾病基因或与心血管形态发生或其他已知疾病的本体关联,选择了5个候选变异(位于DHRS3、OR2G3、LOXL2、FGL1和KLC3)。基因分型结果显示,在该家族中,只有LOXL2基因第2外显子中的c.C133T/p.H45Y与明确的IA表型完全分离。此外,LOXL2已被报道为IA的一个易感基因。

结论

LOXL2基因的c.C133T是一种致病突变,它导致了一部分家族性IA。

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