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Rho 鸟苷酸交换因子是颅内动脉瘤的风险基因。

Rho Guanine Nucleotide Exchange Factor Is a Risk Gene for Intracranial Aneurysms.

机构信息

Department of Neurosurgery, Tianjin Neurological Institute, Tianjin Medical University General Hospital, China (X.Y., Z.Z., Y.Z., M.L., L.H., R.J., S.Y., J.Z., F.Y.).

Human Genome Sequencing Center, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX (J.L., F.Y.).

出版信息

Circ Genom Precis Med. 2018 Jul;11(7):e002099. doi: 10.1161/CIRCGEN.117.002099.

Abstract

BACKGROUND

Intracranial aneurysm (IA) is usually a late-onset disease, affecting 1% to 3% of the general population and leading to life-threatening subarachnoid hemorrhage. Genetic susceptibility has been implicated in IAs, but the causative genes remain elusive.

METHODS

We performed next-generation sequencing in a discovery cohort of 20 Chinese IA patients. Bioinformatics filters were exploited to search for candidate deleterious variants with rare and low allele frequency. We further examined the candidate variants in a multiethnic sample collection of 86 whole exome sequenced unsolved familial IA cases from 3 previously published studies.

RESULTS

We identified that the low-frequency variant c.4394C>A_p.Ala1465Asp (rs2298808) of was significantly associated with IA in our Chinese discovery cohort (=7.3×10; odds ratio=7.34). It was subsequently replicated in Japanese familial IA patients (=0.039; odds ratio=4.00; 95% confidence interval=0.832-14.8) and was associated with IA in the large Chinese sample collection comprising 832 sporadic IA-affected and 599 control individuals (=0.041; odds ratio=1.51; 95% confidence interval=1.02-Inf). When combining the sequencing data of all familial IA patients from 4 different ethnicities (ie, Chinese, Japanese, European American, and French-Canadian), we identified a significantly increased mutation burden for (21/106 versus 11/306; =8.1×10; odds ratio=6.6; 95% confidence interval=2.9-15.8) in cases as compared with controls. In zebrafish, was highly expressed in the brain blood vessel. knockdown caused blood extravasation in the brain region. Endothelial lesions were identified exclusively on cerebral blood vessels in the -deficient zebrafish.

CONCLUSIONS

Our results provide compelling evidence that is a risk gene for IA.

摘要

背景

颅内动脉瘤(IA)通常是一种迟发性疾病,影响普通人群的 1%至 3%,导致危及生命的蛛网膜下腔出血。遗传易感性与 IA 有关,但致病基因仍难以捉摸。

方法

我们在 20 名中国 IA 患者的发现队列中进行了下一代测序。利用生物信息学筛选来寻找具有罕见低等位基因频率的候选有害变异体。我们进一步在来自 3 项先前发表的研究的 86 个全外显子测序未解决的家族性 IA 病例的多民族样本集中检查了候选变异体。

结果

我们发现,在我们的中国发现队列中,的低频变体 c.4394C>A_p.Ala1465Asp(rs2298808)与 IA 显著相关(=7.3×10;优势比=7.34)。随后在日本家族性 IA 患者中得到复制(=0.039;优势比=4.00;95%置信区间=0.832-14.8),并在中国包含 832 名散发性 IA 受影响和 599 名对照个体的大型样本集中与 IA 相关(=0.041;优势比=1.51;95%置信区间=1.02-Inf)。当将来自 4 个不同种族(即中国、日本、欧美和法裔加拿大)的所有家族性 IA 患者的测序数据合并时,我们发现 (21/106 对 11/306;=8.1×10;优势比=6.6;95%置信区间=2.9-15.8)在病例中的突变负担显著增加。在斑马鱼中,在大脑血管中高度表达。 敲低导致大脑区域的血液渗出。在 -缺陷的斑马鱼中仅在脑血管上发现内皮损伤。

结论

我们的研究结果提供了令人信服的证据表明 是 IA 的风险基因。

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