Cooper Richard I, Flack Howard D, Watkin David J
Chemical Crystallography, University of Oxford, 12 Manseld Road, Oxford, Oxfordshire OX1 3TA, England.
Chimie minerale, analytique et appliquee, University of Geneva, Geneva, Switzerland.
Acta Crystallogr C Struct Chem. 2017 Nov 1;73(Pt 11):845-853. doi: 10.1107/S2053229617013304. Epub 2017 Oct 24.
The resonant-scattering contributions to single-crystal X-ray diffraction data enable the absolute structure of crystalline materials to be determined. Crystal structures can be determined even if they contain considerably disordered regions because a correction is available via a discrete Fourier transform of the residual electron density to approximate the X-ray scattering from the disordered region. However, the corrected model cannot normally account for resonant scattering from atoms in the disordered region. Straightforward determination of absolute structure from crystals where the strongly resonantly scattering atoms are not resolved has therefore not been possible. Using an approximate resonant-scattering correction to the X-ray scattering from the disordered regions, we have developed and tested a procedure (HUG) to recover the absolute structure using conventional Flack x refinement or other post-refinement determination methods. Results show that in favourable cases the HUG method works well and the absolute structure can be correctly determined. It offers no useful improvement in cases where the original correction for the disordered region scattering density is problematic, for example, when a large fraction of the scattering density in the crystal is disordered, or when voids are not occupied equally by the disordered species. Crucially, however, if the approach does not work for a given structure, the statistics for the absolute structure measures are not improved, meaning it is unlikely to lead to misassignment of absolute structure.
单晶X射线衍射数据中的共振散射贡献能够确定晶体材料的绝对结构。即使晶体结构包含相当多的无序区域,也能够确定其结构,因为可以通过对残余电子密度进行离散傅里叶变换来校正,以近似无序区域的X射线散射。然而,校正后的模型通常无法解释无序区域中原子的共振散射。因此,从强共振散射原子未解析的晶体中直接确定绝对结构是不可能的。通过对无序区域的X射线散射进行近似共振散射校正,我们开发并测试了一种程序(HUG),使用传统的弗拉克x精修或其他精修后确定方法来恢复绝对结构。结果表明,在有利的情况下,HUG方法效果良好,能够正确确定绝对结构。在对无序区域散射密度进行原始校正存在问题的情况下,例如当晶体中的大部分散射密度无序时,或者当无序物种没有均匀占据空隙时,该方法没有提供有用的改进。然而,至关重要的是,如果该方法对给定结构不起作用,绝对结构测量的统计数据不会得到改善,这意味着它不太可能导致绝对结构的错误归属。