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由二聚体协同形成二十面体脯氨酸簇。

Cooperative Formation of Icosahedral Proline Clusters from Dimers.

作者信息

Jacobs Alexander D, Jovan Jose K V, Horness Rachel, Raghavachari Krishnan, Thielges Megan C, Clemmer David E

机构信息

Department of Chemistry, Indiana University, Bloomington, IN, 47405, USA.

出版信息

J Am Soc Mass Spectrom. 2018 Jan;29(1):95-102. doi: 10.1007/s13361-017-1833-6. Epub 2017 Nov 10.

Abstract

Ion mobility spectrometry-mass spectrometry and Fourier transform infrared spectroscopy (FTIR) techniques were combined with quantum chemical calculations to examine the origin of icosahedral clusters of the amino acid proline. When enantiopure proline solutions are electrosprayed (using nanospray) from 100 mM ammonium acetate, only three peaks are observed in the mass spectrum across a concentration range of five orders of magnitude: a monomer [Pro+H] species, favored from 0.001 to 0.01 mM proline concentrations; a dimer [2Pro+H] species, the most abundant species for proline concentrations above 0.01 mM; and, the dimer and dodecamer [12Pro+2H] for 1.0 mM and more concentrated proline solutions. Electrospraying racemic D/L-proline solutions from 100 mM ammonium acetate leads to a monomer at low proline concentrations (0.001 to 0.1 mM), and a dimer at higher concentrations (>0.09 mM), as well as a very small population of 8 to 15 Pro clusters that comprise <0.1% of the total ion signals even at the highest proline concentration. Solution FTIR studies show unique features that increase in intensity in the enantiopure proline solutions, consistent with clustering, presumably from the icosahedral geometry in bulk solution. When normalized for the total proline, these results are indicative of a cooperative formation of the enantiopure 12Pro species from 2Pro. Graphical Abstract.

摘要

离子淌度谱-质谱联用技术和傅里叶变换红外光谱(FTIR)技术与量子化学计算相结合,以研究氨基酸脯氨酸二十面体簇的起源。当从100 mM醋酸铵中电喷雾(使用纳米喷雾)对映体纯的脯氨酸溶液时,在五个数量级的浓度范围内,质谱中仅观察到三个峰:单体[Pro+H]物种,在脯氨酸浓度为0.001至0.01 mM时占优势;二聚体[2Pro+H]物种,在脯氨酸浓度高于0.01 mM时是最丰富的物种;以及,对于1.0 mM及更高浓度的脯氨酸溶液,二聚体和十二聚体[12Pro+2H]。从100 mM醋酸铵中电喷雾外消旋D/L-脯氨酸溶液,在低脯氨酸浓度(0.001至0.1 mM)下产生单体,在较高浓度(>0.09 mM)下产生二聚体,以及非常少量的8至15个脯氨酸簇,即使在最高脯氨酸浓度下,这些簇也占总离子信号的<0.1%。溶液FTIR研究显示了对映体纯脯氨酸溶液中强度增加的独特特征,这与簇的形成一致,推测是由于本体溶液中的二十面体几何结构。当对总脯氨酸进行归一化时,这些结果表明对映体纯的12Pro物种是由2Pro协同形成的。图形摘要。

相似文献

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Cooperative Formation of Icosahedral Proline Clusters from Dimers.由二聚体协同形成二十面体脯氨酸簇。
J Am Soc Mass Spectrom. 2018 Jan;29(1):95-102. doi: 10.1007/s13361-017-1833-6. Epub 2017 Nov 10.
2
Chirality and packing in small proline clusters.手性和小脯氨酸簇的堆积
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Oscillations of chiral preference in proline clusters.脯氨酸簇中手性偏好的振荡。
J Phys Chem A. 2013 Feb 14;117(6):1035-41. doi: 10.1021/jp302677n. Epub 2012 Aug 3.

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Ion mobility analysis of molecular dynamics.分子动力学的离子淌度分析
Annu Rev Phys Chem. 2014;65:175-96. doi: 10.1146/annurev-physchem-040513-103644. Epub 2013 Dec 9.
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Chirality and packing in small proline clusters.手性和小脯氨酸簇的堆积
J Phys Chem B. 2012 Sep 20;116(37):11442-6. doi: 10.1021/jp3069915. Epub 2012 Sep 6.
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Oscillations of chiral preference in proline clusters.脯氨酸簇中手性偏好的振荡。
J Phys Chem A. 2013 Feb 14;117(6):1035-41. doi: 10.1021/jp302677n. Epub 2012 Aug 3.

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