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斑马鱼二氢叶酸还原酶热失活及伴侣蛋白辅助折叠的动力学与热力学

Kinetics and thermodynamics of the thermal inactivation and chaperone assisted folding of zebrafish dihydrofolate reductase.

作者信息

Thapliyal Charu, Jain Neha, Rashid Naira, Chaudhuri Chattopadhyay Pratima

机构信息

Amity Institute of Biotechnology, Amity University, Sector 125, Noida, Uttar Pradesh 201313, India; Kusuma School of Biological Sciences, Indian Institute of Technology Delhi, Hauz Khas, New Delhi 110016, India.

Kusuma School of Biological Sciences, Indian Institute of Technology Delhi, Hauz Khas, New Delhi 110016, India.

出版信息

Arch Biochem Biophys. 2018 Jan 1;637:21-30. doi: 10.1016/j.abb.2017.11.006. Epub 2017 Nov 11.

Abstract

The maintenance of thermal stability is a major issue in protein engineering as many proteins tend to form inactive aggregates at higher temperatures. Zebrafish DHFR, an essential protein for the survival of cells, shows irreversible thermal unfolding transition. The protein exhibits complete unfolding and loss of activity at 50 °C as monitored by UV-Visible, fluorescence and far UV-CD spectroscopy. The heat induced inactivation of zDHFR follows first-order kinetics and Arrhenius law. The variation in the value of inactivation rate constant, k with increasing temperatures depicts faster inactivation at elevated temperatures. We have attempted to study the chaperoning ability of a shorter variant of GroEL (minichaperone) and compared it with that of conventional GroEL-GroES chaperone system. Both the chaperone system prevented the aggregation and assisted in refolding of zDHFR. The rate of thermal inactivation was significantly retarded in the presence of chaperones which indicate that it enhances the thermal stability of the enzyme. As minichaperone is less complex, and does not require high energy co-factors like ATP, for its function as compared to conventional GroEL-GroES system, it can act as a very good in vitro as well as in vivo chaperone model for monitoring assisted protein folding phenomenon.

摘要

热稳定性的维持是蛋白质工程中的一个主要问题,因为许多蛋白质在较高温度下容易形成无活性的聚集体。斑马鱼二氢叶酸还原酶(DHFR)是细胞存活所必需的蛋白质,表现出不可逆的热解折叠转变。通过紫外可见光谱、荧光光谱和远紫外圆二色光谱监测,该蛋白质在50°C时表现出完全解折叠和活性丧失。热诱导的斑马鱼DHFR失活遵循一级动力学和阿累尼乌斯定律。随着温度升高,失活速率常数k值的变化表明在高温下失活更快。我们试图研究较短变体的GroEL(微型伴侣蛋白)的伴侣功能,并将其与传统的GroEL-GroES伴侣蛋白系统进行比较。两种伴侣蛋白系统都能防止斑马鱼DHFR聚集并协助其重折叠。在有伴侣蛋白存在的情况下,热失活速率显著减慢,这表明伴侣蛋白增强了该酶的热稳定性。由于微型伴侣蛋白相比传统的GroEL-GroES系统结构更简单,且其功能不需要像ATP这样的高能辅助因子,它可以作为一个非常好的体外和体内伴侣蛋白模型来监测辅助蛋白质折叠现象。

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