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SSPACE-LongRead: scaffolding bacterial draft genomes using long read sequence information.SSPACE-LongRead:利用长读段序列信息搭建细菌草图基因组支架
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Infernal 1.1: 100-fold faster RNA homology searches. Infernal 1.1:100 倍更快的 RNA 同源性搜索。
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台湾美丽百合根际促生细菌C1L的全基因组序列

Complete Genome Sequence of C1L, a Plant Growth-Promoting Rhizobacterium from the Rhizosphere of Formosa Lily in Taiwan.

作者信息

Huang Chien-Jui, Zheng Po-Xing, Ou Jheng-Yang, Lin Yao-Cheng, Chen Chao-Ying

机构信息

Department of Plant Medicine, National Chiayi University, Chiayi City, Taiwan, Republic of China.

Biotechnology Center in Southern Taiwan, Agricultural Biotechnology Research Center, Academia Sinica, Tainan, Taiwan, Republic of China.

出版信息

Genome Announc. 2017 Nov 16;5(46):e01290-17. doi: 10.1128/genomeA.01290-17.

DOI:10.1128/genomeA.01290-17
PMID:29146835
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5690342/
Abstract

C1L, a plant growth-promoting rhizobacterium, provides protection against fungal pathogens in monocot plants. To gain new insights into the biocontrol mechanisms used by this rhizobacterium, we determined the complete genome sequence of C1L. One chromosome and three plasmids were identified with a total size of ~6.0 Mb.

摘要

C1L是一种促进植物生长的根际细菌,可为单子叶植物抵御真菌病原体。为了深入了解这种根际细菌的生物防治机制,我们测定了C1L的完整基因组序列。鉴定出一条染色体和三个质粒,总大小约为6.0 Mb。