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两种病毒,MCV1 和 MCV2,它们感染了从深海热液喷口分离出来的 Marinitoga 细菌:功能和基因组分析。

Two viruses, MCV1 and MCV2, which infect Marinitoga bacteria isolated from deep-sea hydrothermal vents: functional and genomic analysis.

机构信息

Université de Bretagne Occidentale (UBO), Institut Universitaire Européen de la Mer (IUEM) - UMR 6197, Laboratoire de Microbiologie des Environnements Extrêmes, rue Dumont d'Urville, F-29280 Plouzané, France.

CNRS, IUEM - UMR 6197, Laboratoire de Microbiologie des Environnements Extrêmes (LMEE), rue Dumont d'Urville, F-29280 Plouzané, France.

出版信息

Environ Microbiol. 2018 Feb;20(2):577-587. doi: 10.1111/1462-2920.13967. Epub 2017 Dec 4.

Abstract

Viruses represent a driving force in the evolution of microorganisms including those thriving in extreme environments. However, our knowledge of the viral diversity associated to microorganisms inhabiting the deep-sea hydrothermal vents remains limited. The phylum of Thermotogae, including thermophilic bacteria, is well represented in this environment. Only one virus was described in this phylum, MPV1 carried by Marinitoga piezophila. In this study, we report on the functional and genomic characterization of two new bacterioviruses that infect bacteria from the Marinitoga genus. Marinitoga camini virus 1 and 2 (MCV1 and MCV2) are temperate siphoviruses with a linear dsDNA genome of 53.4 kb and 50.5 kb respectively. Here, we present a comparative genomic analysis of the MCV1 and MCV2 viral genomes with that of MPV1. The results indicate that even if the host strains come from geographically distant sites, their genomes share numerous similarities. Interestingly, heavy metals did not induce viral production, instead the host of MCV1 produced membrane vesicles. This study highlights interaction of mobile genetic elements (MGE) with their hosts and the importance of including hosts-MGEs' relationships in ecological studies.

摘要

病毒是包括极端环境中微生物进化的驱动力之一。然而,我们对栖息在深海热液喷口的微生物相关病毒多样性的了解仍然有限。厚壁菌门(Thermotogae)包括嗜热细菌,在这种环境中广泛存在。该门仅有一种病毒被描述,即 Marinitoga piezophila 携带的 MVP1。在这项研究中,我们报告了两种新的细菌病毒的功能和基因组特征,它们感染 Marinitoga 属的细菌。Marinitoga camini 病毒 1 和 2(MCV1 和 MCV2)是温和的长尾噬菌体,具有 53.4kb 和 50.5kb 的线性 dsDNA 基因组。在这里,我们对 MCV1 和 MCV2 病毒基因组与 MVP1 的基因组进行了比较基因组分析。结果表明,即使宿主菌株来自地理位置遥远的地点,它们的基因组也有许多相似之处。有趣的是,重金属并没有诱导病毒的产生,相反,MCV1 的宿主产生了膜泡。这项研究强调了移动遗传元件(MGE)与其宿主的相互作用,以及在生态研究中纳入宿主-MGE 关系的重要性。

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