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单体逆转录酶的机械化学

The mechano-chemistry of a monomeric reverse transcriptase.

作者信息

Malik Omri, Khamis Hadeel, Rudnizky Sergei, Kaplan Ariel

机构信息

Faculty of Biology, Technion-Israel Institute of Technology, Haifa 32000, Israel.

Russell Berrie Nanotechnology Institute, Technion-Israel Institute of Technology, Haifa 32000, Israel.

出版信息

Nucleic Acids Res. 2017 Dec 15;45(22):12954-12962. doi: 10.1093/nar/gkx1168.

Abstract

Retroviral reverse transcriptase catalyses the synthesis of an integration-competent dsDNA molecule, using as a substrate the viral RNA. Using optical tweezers, we follow the Murine Leukemia Virus reverse transcriptase as it performs strand-displacement polymerization on a template under mechanical force. Our results indicate that reverse transcriptase functions as a Brownian ratchet, with dNTP binding as the rectifying reaction of the ratchet. We also found that reverse transcriptase is a relatively passive enzyme, able to polymerize on structured templates by exploiting their thermal breathing. Finally, our results indicate that the enzyme enters the recently characterized backtracking state from the pre-translocation complex.

摘要

逆转录病毒逆转录酶以病毒RNA为底物,催化合成具有整合能力的双链DNA分子。我们使用光镊跟踪小鼠白血病病毒逆转录酶,观察其在机械力作用下在模板上进行链置换聚合反应的过程。我们的结果表明,逆转录酶起着布朗棘轮的作用,dNTP结合作为棘轮的整流反应。我们还发现,逆转录酶是一种相对被动的酶,能够通过利用结构化模板的热呼吸作用在其上进行聚合反应。最后,我们的结果表明,该酶从转位前复合物进入最近表征的回溯状态。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bcc1/5728418/bb73905d2acb/gkx1168fig1.jpg

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