Akermi Nizar, Mkaouar Héla, Jeblaoui Amin, Kriaa Aicha, Gargouri Ali, Maguin Emmanuelle, Rhimi Moez
UMR 1319 Micalis, INRA, AgroParisTech, Universite Paris-Saclay, Microbiota Interaction with Human and Animal Team, 78350, Jouy-en-Josas, France.
Laboratory of Molecular Biology of Eukaryotes, Center of Biotechnology of Sfax, University of Sfax, 3038, Sfax, Tunisia.
Recent Pat Biotechnol. 2018;12(4):233-238. doi: 10.2174/1872208311666171122153908.
Ecotins are serine protease inhibitors which are generally found in the periplasmic compartment. These inhibitors act on a wide range of serine proteases with different efficiencies. Actually, only few Ecotins were studied, and the main characterized proteins were derived from Escherichia coli. Functional studies of this latter protein allowed the development of numerous patents related to Ecotin relevant biotechnological applications.
This review aims to give an update on the relevant Ecotins already described and to provide a concise overview concerning the relevant patented applications of these serine protease inhibitors.
In this review, we focus on the analysis of Ecotin diversity and their distribution using Pfam protein data base. Moreover, we report a detailed overview regarding the biotechnological applications of the Ecotins based on all patents associated to Ecotins and their biotechnological applications searched in European Patent Office (Espacenet), United States Patent and National Patent Collections (WIPO) patents databases.
On the basis of this analysis, we demonstrate that Ecotins are mostly present in bacteria. Study of Ecotin sequences and their biochemical properties reveals that they are a small serine protease inhibitor group. The high stability and specificity of Ecotins promote their biotechnological uses in several fields. The original structural organization of Ecotin-protease complexes and their flexibility lead to several patented applications.
This review showed that Ecotins have many attractive biotechnological applications. Potential of Ecotins needs to be more investigated seeing the limited available data related to this protein family. Thus, further functional analyses will promote the use of Ecotins.
生态素是丝氨酸蛋白酶抑制剂,通常存在于周质区室中。这些抑制剂以不同效率作用于多种丝氨酸蛋白酶。实际上,仅对少数生态素进行了研究,且主要表征的蛋白质源自大肠杆菌。对后一种蛋白质的功能研究催生了众多与生态素相关生物技术应用的专利。
本综述旨在更新已描述的相关生态素,并简要概述这些丝氨酸蛋白酶抑制剂的相关专利应用。
在本综述中,我们重点利用Pfam蛋白质数据库分析生态素的多样性及其分布。此外,我们基于在欧洲专利局(Espacenet)、美国专利和国家专利数据库(WIPO)中搜索到的与生态素及其生物技术应用相关的所有专利,详细概述了生态素的生物技术应用。
基于该分析,我们证明生态素大多存在于细菌中。对生态素序列及其生化特性的研究表明,它们是一个小的丝氨酸蛋白酶抑制剂组。生态素的高稳定性和特异性促进了它们在多个领域的生物技术应用。生态素 - 蛋白酶复合物的原始结构组织及其灵活性导致了多项专利应用。
本综述表明生态素有许多有吸引力的生物技术应用。鉴于与该蛋白质家族相关的可用数据有限,生态素的潜力需要更多研究。因此,进一步的功能分析将促进生态素的应用。