Modi Bhavi P, Teves Maria E, Pearson Laurel N, Parikh Hardik I, Haymond-Thornburg Hannah, Tucker John L, Chaemsaithong Piya, Gomez-Lopez Nardhy, York Timothy P, Romero Roberto, Strauss Jerome F
Department of Human and Molecular Genetics, Virginia Commonwealth University, Richmond, Virginia.
Department of Obstetrics and Gynecology, Virginia Commonwealth University, Richmond, Virginia.
Mol Genet Genomic Med. 2017 Nov;5(6):720-729. doi: 10.1002/mgg3.330. Epub 2017 Aug 23.
Twin studies have revealed a significant contribution of the fetal genome to risk of preterm birth. Preterm premature rupture of membranes (PPROM) is the leading identifiable cause of preterm delivery. Infection and inflammation of the fetal membranes is commonly found associated with PPROM.
We carried out whole exome sequencing (WES) of genomic DNA from neonates born of African-American mothers whose pregnancies were complicated by PPROM (76) or were normal term pregnancies (N = 43) to identify mutations in 35 candidate genes involved in innate immunity and host defenses against microbes. Targeted genotyping of mutations in the candidates discovered by WES was conducted on an additional 188 PPROM cases and 175 controls.
We identified rare heterozygous nonsense and frameshift mutations in several of the candidate genes, including CARD6, CARD8, DEFB1, FUT2, MBL2, NLP10, NLRP12, and NOD2. We discovered that some mutations (CARD6, DEFB1, FUT2, MBL2, NLRP10, NOD2) were present only in PPROM cases.
We conclude that rare damaging mutations in innate immunity and host defense genes, the majority being heterozygous, are more frequent in neonates born of pregnancies complicated by PPROM. These findings suggest that the risk of preterm birth in African-Americans may be conferred by mutations in multiple genes encoding proteins involved in dampening the innate immune response or protecting the host against microbial infection and microbial products.
双胞胎研究表明胎儿基因组对早产风险有重大影响。胎膜早破(PPROM)是早产的主要可识别原因。胎膜感染和炎症常见于PPROM。
我们对非裔美国母亲所生新生儿的基因组DNA进行了全外显子组测序(WES),这些母亲的妊娠合并PPROM(76例)或为足月妊娠(N = 43例),以确定35个参与先天免疫和宿主抗微生物防御的候选基因中的突变。对WES发现的候选基因中的突变进行靶向基因分型,另外纳入188例PPROM病例和175例对照。
我们在几个候选基因中鉴定出罕见的杂合无义突变和移码突变,包括CARD6、CARD8、DEFB1、FUT2、MBL2、NLP10、NLRP12和NOD2。我们发现一些突变(CARD6、DEFB1、FUT2、MBL2、NLRP10、NOD2)仅存在于PPROM病例中。
我们得出结论,先天免疫和宿主防御基因中的罕见有害突变(大多数为杂合突变)在合并PPROM的妊娠所生新生儿中更为常见。这些发现表明,非裔美国人的早产风险可能由多个编码参与抑制先天免疫反应或保护宿主免受微生物感染及微生物产物影响的蛋白质的基因突变所致。