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卤素-卤素相互作用在药物奥昔氯生三种新溶剂化物晶体结构中的作用

Role of halogen-halogen contacts in the crystal structures of three new solvates of the drug oxyclozanide.

作者信息

Sridhar Balasubramanian, Ravikumar Krishnan

机构信息

Center for X-ray Crystallography, CSIR-Indian Institute of Chemical Technology, Hyderabad 500 007, India.

出版信息

Acta Crystallogr C Struct Chem. 2017 Dec 1;73(Pt 12):1056-1063. doi: 10.1107/S2053229617015923. Epub 2017 Nov 8.

DOI:10.1107/S2053229617015923
PMID:29206115
Abstract

Halogen-halogen contacts are electrostatic in nature and exhibit directionality similar to hydrogen bonds. Oxyclozanide [systematic name: 2,3,5-trichloro-N-(3,5-dichloro-2-hydroxyphenyl)-6-hydroxybenzamide] is a drug used for the treatment of fascioliasis in domestic animals. The molecule carries five chlorine substituents and represents an ideal candidate for the study of halogen bonds in the crystal. Three new crystalline solvates of oxyclozanide, namely, oxyclozanide benzene hemisolvate, CHClNO·0.5CH, (I), oxyclozanide xylene hemisolvate, CHClNO·0.5CH, (II), and oxyclozanide toluene hemisolvate, CHClNO·0.5CH, (III), were structurally characterized. In this context, the crystal structure of oxyclozanide chlorobenzene hemisolvate, CHClNO·0.5CHCl, (IV), was redetermined based on intensity data collected at 100 K. In all four solvates, the cocrystallized solvent molecules are located on crystallographic inversion centres. Solvates (I)-(IV) exhibit similar one-dimensional hydrogen-bonded chains generated by O-H...O, O-H...Cl and Cl...Cl interactions. The extension of these one-dimensional chains into two-dimensional layers is promoted by Cl...Cl and C-H...π contacts. Solvates (III) and (IV) are isostructural and differ from (I) and (II) with respect to subtle details concerning the intermolecular contacts.

摘要

卤素-卤素键本质上是静电作用的,并且表现出与氢键相似的方向性。奥昔氯生[系统名称:2,3,5-三氯-N-(3,5-二氯-2-羟基苯基)-6-羟基苯甲酰胺]是一种用于治疗家畜片形吸虫病的药物。该分子带有五个氯取代基,是研究晶体中卤素键的理想候选物。对奥昔氯生的三种新型晶体溶剂化物进行了结构表征,即奥昔氯生苯半溶剂化物,CHClNO·0.5CH,(I);奥昔氯生二甲苯半溶剂化物,CHClNO·0.5CH,(II);以及奥昔氯生甲苯半溶剂化物,CHClNO·0.5CH,(III)。在此背景下,基于在100 K收集的强度数据重新测定了奥昔氯生氯苯半溶剂化物CHClNO·0.5CHCl,(IV)的晶体结构。在所有四种溶剂化物中,共结晶的溶剂分子位于晶体学反演中心上。溶剂化物(I)-(IV)表现出由O-H...O、O-H...Cl和Cl...Cl相互作用产生的类似一维氢键链。Cl...Cl和C-H...π接触促进了这些一维链扩展为二维层。溶剂化物(III)和(IV)是同构的,在分子间接触的细微细节方面与(I)和(II)不同。

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