• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

两种不同方法在拟南芥胚胎致死突变体的胚胎后效应高通量研究中的适用性。

Suitability of two distinct approaches for the high-throughput study of the post-embryonic effects of embryo-lethal mutations in Arabidopsis.

机构信息

Instituto de Bioingeniería, Universidad Miguel Hernández, Campus de Elche, 03202, Elche, Spain.

出版信息

Sci Rep. 2017 Dec 5;7(1):17010. doi: 10.1038/s41598-017-17218-z.

DOI:10.1038/s41598-017-17218-z
PMID:29209028
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5717279/
Abstract

Several hundred genes are required for embryonic and gametophytic development in the model plant Arabidopsis thaliana, as inferred from the lethality of their mutations. Despite many of these genes are expressed throughout the plant life cycle, the corresponding mutants arrest at early stages, preventing the study of their post-embryonic functions by conventional methods. Clonal analysis represents an effective solution to this problem by uncovering the effects of embryo-lethal mutations in sectors of mutant cells within an otherwise normal adult plant. In this pilot study, we have evaluated the suitability of two sector induction methods for the large-scale study of the post-embryonic effects of embryo-lethal (emb) mutations in Arabidopsis. In line with the interests of our laboratory, we selected 24 emb mutations that damage genes that are expressed in wild-type vegetative leaves but whose effects on leaf development remain unknown. For the induction of mutant sectors in adult plants, we followed one approach based on the X-ray irradiation of 'cell autonomy' (CAUT) lines, and another based on the site-specific excision of transgenes mediated by Cre recombinase. We conclude that both methods are time-consuming and difficult to scale up, being better suited for the study of emb mutations on a case-by-case basis.

摘要

数百个基因对于拟南芥(Arabidopsis thaliana)胚胎和配子体发育是必需的,这可以从它们突变的致死性推断出来。尽管这些基因中的许多在整个植物生命周期中都有表达,但相应的突变体在早期就停止了生长,这使得传统方法无法研究它们的胚胎后功能。克隆分析通过揭示在正常成年植物的突变细胞的某些区域内的胚胎致死突变的影响,为解决这个问题提供了有效的解决方案。在这项初步研究中,我们评估了两种扇区诱导方法在大规模研究拟南芥胚胎致死(emb)突变的胚胎后效应中的适用性。根据我们实验室的兴趣,我们选择了 24 个 emb 突变,这些突变破坏了在野生型营养叶中表达的基因,但它们对叶片发育的影响尚不清楚。为了在成年植物中诱导突变扇区,我们采用了一种基于 X 射线照射“细胞自主性”(CAUT)系的方法,另一种基于 Cre 重组酶介导的转基因定点切除的方法。我们得出的结论是,这两种方法都很耗时,难以扩展,更适合逐个案例研究 emb 突变。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/905d/5717279/8f03b4a62c7d/41598_2017_17218_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/905d/5717279/709d3014d91b/41598_2017_17218_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/905d/5717279/0ea0620ed65c/41598_2017_17218_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/905d/5717279/362482fd4695/41598_2017_17218_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/905d/5717279/cbb7032b16ec/41598_2017_17218_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/905d/5717279/c8550ef0077a/41598_2017_17218_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/905d/5717279/bf4e03ab3ab4/41598_2017_17218_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/905d/5717279/2ef1db750255/41598_2017_17218_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/905d/5717279/8f03b4a62c7d/41598_2017_17218_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/905d/5717279/709d3014d91b/41598_2017_17218_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/905d/5717279/0ea0620ed65c/41598_2017_17218_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/905d/5717279/362482fd4695/41598_2017_17218_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/905d/5717279/cbb7032b16ec/41598_2017_17218_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/905d/5717279/c8550ef0077a/41598_2017_17218_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/905d/5717279/bf4e03ab3ab4/41598_2017_17218_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/905d/5717279/2ef1db750255/41598_2017_17218_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/905d/5717279/8f03b4a62c7d/41598_2017_17218_Fig8_HTML.jpg

相似文献

1
Suitability of two distinct approaches for the high-throughput study of the post-embryonic effects of embryo-lethal mutations in Arabidopsis.两种不同方法在拟南芥胚胎致死突变体的胚胎后效应高通量研究中的适用性。
Sci Rep. 2017 Dec 5;7(1):17010. doi: 10.1038/s41598-017-17218-z.
2
Uncovering the post-embryonic functions of gametophytic- and embryonic-lethal genes.揭示配子体致死和胚胎致死基因的胚胎后功能。
Trends Plant Sci. 2011 Jun;16(6):336-45. doi: 10.1016/j.tplants.2011.02.007. Epub 2011 Mar 17.
3
Uncovering the post-embryonic role of embryo essential genes in Arabidopsis using the controlled induction of visibly marked genetic mosaics: EMB506, an illustration.利用可见标记遗传嵌合体的可控诱导揭示拟南芥胚胎必需基因的胚后作用:以EMB506为例
Plant Mol Biol. 2006 May;61(1-2):179-94. doi: 10.1007/s11103-006-6268-6.
4
Impact of segmental chromosomal duplications on leaf size in the grandifolia-D mutants of Arabidopsis thaliana.染色体片段重复对拟南芥大叶-D突变体叶片大小的影响。
Plant J. 2009 Oct;60(1):122-33. doi: 10.1111/j.1365-313X.2009.03940.x. Epub 2009 Jun 5.
5
Impaired Chloroplast Biogenesis in Immutans, an Arabidopsis Variegation Mutant, Modifies Developmental Programming, Cell Wall Composition and Resistance to Pseudomonas syringae.拟南芥叶色变异突变体Immutans中叶绿体生物合成受损,改变了发育程序、细胞壁组成及对丁香假单胞菌的抗性。
PLoS One. 2016 Apr 6;11(4):e0150983. doi: 10.1371/journal.pone.0150983. eCollection 2016.
6
Hyper-activation of the TCP4 transcription factor in Arabidopsis thaliana accelerates multiple aspects of plant maturation.拟南芥 TCP4 转录因子的超活化加速了植物成熟的多个方面。
Plant J. 2011 Aug;67(4):595-607. doi: 10.1111/j.1365-313X.2011.04616.x. Epub 2011 Jul 4.
7
The role of Arabidopsis thaliana NAR1, a cytosolic iron-sulfur cluster assembly component, in gametophytic gene expression and oxidative stress responses in vegetative tissue.拟南芥 NAR1 作为细胞质铁硫簇组装成分在配子体基因表达和营养组织中氧化胁迫响应中的作用。
New Phytol. 2013 Sep;199(4):925-935. doi: 10.1111/nph.12350. Epub 2013 Jun 5.
8
Cell-by-cell developmental transition from embryo to post-germination phase revealed by heterochronic gene expression and ER-body formation in Arabidopsis leafy cotyledon mutants.拟南芥叶状子叶突变体中异时基因表达和内质网体形成揭示的从胚胎到萌发后阶段的逐细胞发育转变
Plant Cell Physiol. 2014 Dec;55(12):2112-25. doi: 10.1093/pcp/pcu139. Epub 2014 Oct 4.
9
Arabidopsis thaliana FLO2 is Involved in Efficiency of Photoassimilate Translocation, Which is Associated with Leaf Growth and Aging, Yield of Seeds and Seed Quality.拟南芥FLO2参与光合同化物转运效率,这与叶片生长和衰老、种子产量及种子质量相关。
Plant Cell Physiol. 2017 Mar 1;58(3):440-450. doi: 10.1093/pcp/pcw217.
10
Gametophyte Development Needs Mitochondrial Coproporphyrinogen III Oxidase Function.配子体发育需要线粒体原卟啉原氧化酶功能。
Plant Physiol. 2017 May;174(1):258-275. doi: 10.1104/pp.16.01482. Epub 2017 Mar 7.

引用本文的文献

1
Taking the Wheel - DNA Methylation as a Driving Force of Plant Embryonic Development.掌控全局——DNA甲基化作为植物胚胎发育的驱动力
Front Plant Sci. 2021 Oct 29;12:764999. doi: 10.3389/fpls.2021.764999. eCollection 2021.
2
CRISPR-TSKO: A Technique for Efficient Mutagenesis in Specific Cell Types, Tissues, or Organs in Arabidopsis.CRISPR-TSKO:拟南芥中特定细胞类型、组织或器官的高效突变技术。
Plant Cell. 2019 Dec;31(12):2868-2887. doi: 10.1105/tpc.19.00454. Epub 2019 Sep 27.

本文引用的文献

1
The ANGULATA7 gene encodes a DnaJ-like zinc finger-domain protein involved in chloroplast function and leaf development in Arabidopsis.ANGULATA7基因编码一种类似DnaJ的锌指结构域蛋白,该蛋白参与拟南芥叶绿体功能和叶片发育。
Plant J. 2017 Mar;89(5):870-884. doi: 10.1111/tpj.13466. Epub 2017 Feb 11.
2
A high resolution map of the Arabidopsis thaliana developmental transcriptome based on RNA-seq profiling.基于RNA测序分析的拟南芥发育转录组高分辨率图谱。
Plant J. 2016 Dec;88(6):1058-1070. doi: 10.1111/tpj.13312. Epub 2016 Nov 19.
3
Plastid control of abaxial-adaxial patterning.
质体对叶片远轴面-近轴面模式的调控
Sci Rep. 2015 Nov 2;5:15975. doi: 10.1038/srep15975.
4
Rapid identification of angulata leaf mutations using next-generation sequencing.使用下一代测序技术快速鉴定安古拉塔叶突变体
Planta. 2014 Nov;240(5):1113-22. doi: 10.1007/s00425-014-2137-8. Epub 2014 Aug 8.
5
Uncovering the post-embryonic functions of gametophytic- and embryonic-lethal genes.揭示配子体致死和胚胎致死基因的胚胎后功能。
Trends Plant Sci. 2011 Jun;16(6):336-45. doi: 10.1016/j.tplants.2011.02.007. Epub 2011 Mar 17.
6
The RPN5 subunit of the 26s proteasome is essential for gametogenesis, sporophyte development, and complex assembly in Arabidopsis.26S蛋白酶体的RPN5亚基对于拟南芥的配子发生、孢子体发育和复合体组装至关重要。
Plant Cell. 2009 Feb;21(2):460-78. doi: 10.1105/tpc.108.064444. Epub 2009 Feb 27.
7
The essential gene EMB1611 maintains shoot apical meristem function during Arabidopsis development.必需基因EMB1611在拟南芥发育过程中维持茎尖分生组织的功能。
Plant J. 2009 Feb;57(4):579-92. doi: 10.1111/j.1365-313X.2008.03708.x. Epub 2008 Oct 8.
8
CAUT lines: a novel resource for studies of cell autonomy in Arabidopsis.
Plant J. 2008 Feb;53(4):645-60. doi: 10.1111/j.1365-313X.2007.03321.x.
9
INCURVATA2 encodes the catalytic subunit of DNA Polymerase alpha and interacts with genes involved in chromatin-mediated cellular memory in Arabidopsis thaliana.INCURVATA2编码DNA聚合酶α的催化亚基,并与拟南芥中参与染色质介导的细胞记忆的基因相互作用。
Plant Cell. 2007 Sep;19(9):2822-38. doi: 10.1105/tpc.107.054130. Epub 2007 Sep 14.
10
An "Electronic Fluorescent Pictograph" browser for exploring and analyzing large-scale biological data sets.用于探索和分析大规模生物数据集的“电子荧光图像”浏览器。
PLoS One. 2007 Aug 8;2(8):e718. doi: 10.1371/journal.pone.0000718.