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尼氏艾美耳球虫配子体基因的鉴定与分析揭示了艾美耳球虫属(球虫纲,顶复门)内配子体基因的剪接事件以及壁形成蛋白中的保守基序。

Identification and analysis of Eimeria nieschulzi gametocyte genes reveal splicing events of gam genes and conserved motifs in the wall-forming proteins within the genus Eimeria (Coccidia, Apicomplexa).

作者信息

Wiedmer Stefanie, Erdbeer Alexander, Volke Beate, Randel Stephanie, Kapplusch Franz, Hanig Sacha, Kurth Michael

机构信息

Institute for Zoology, Technische Universität Dresden, Helmholtzstraße 10, 01062 Dresden, Germany.

出版信息

Parasite. 2017;24:50. doi: 10.1051/parasite/2017049. Epub 2017 Dec 6.

DOI:10.1051/parasite/2017049
PMID:29210668
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5718062/
Abstract

The genus Eimeria (Apicomplexa, Coccidia) provides a wide range of different species with different hosts to study common and variable features within the genus and its species. A common characteristic of all known Eimeria species is the oocyst, the infectious stage where its life cycle starts and ends. In our study, we utilized Eimeria nieschulzi as a model organism. This rat-specific parasite has complex oocyst morphology and can be transfected and even cultivated in vitro up to the oocyst stage. We wanted to elucidate how the known oocyst wall-forming proteins are preserved in this rodent Eimeria species compared to other Eimeria. In newly obtained genomics data, we were able to identify different gametocyte genes that are orthologous to already known gam genes involved in the oocyst wall formation of avian Eimeria species. These genes appeared putatively as single exon genes, but cDNA analysis showed alternative splicing events in the transcripts. The analysis of the translated sequence revealed different conserved motifs but also dissimilar regions in GAM proteins, as well as polymorphic regions. The occurrence of an underrepresented gam56 gene version suggests the existence of a second distinct E. nieschulzi genotype within the E. nieschulzi Landers isolate that we maintain.

摘要

艾美耳属(顶复门,球虫纲)包含多种不同的物种,寄生于不同宿主,可用于研究该属及其物种的共同特征和可变特征。所有已知艾美耳属物种的一个共同特征是卵囊,它是生命周期开始和结束的感染阶段。在我们的研究中,我们使用尼氏艾美耳球虫作为模式生物。这种特定于大鼠的寄生虫具有复杂的卵囊形态,并且可以进行转染,甚至在体外培养至卵囊阶段。我们想阐明与其他艾美耳属相比,这种啮齿动物艾美耳属物种中已知的卵囊壁形成蛋白是如何保留的。在新获得的基因组数据中,我们能够鉴定出与已知参与禽艾美耳属物种卵囊壁形成的gam基因直系同源的不同配子体基因。这些基因推测为单外显子基因,但cDNA分析显示转录本中存在可变剪接事件。对翻译序列的分析揭示了GAM蛋白中不同的保守基序以及不同区域,还有多态性区域。一个表达量较低的gam56基因版本的出现表明,在我们保存的尼氏艾美耳球虫兰德斯分离株中存在第二种不同的尼氏艾美耳球虫基因型。

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Identification and analysis of Eimeria nieschulzi gametocyte genes reveal splicing events of gam genes and conserved motifs in the wall-forming proteins within the genus Eimeria (Coccidia, Apicomplexa).尼氏艾美耳球虫配子体基因的鉴定与分析揭示了艾美耳球虫属(球虫纲,顶复门)内配子体基因的剪接事件以及壁形成蛋白中的保守基序。
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本文引用的文献

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Int J Parasitol. 2016 Aug;46(9):537-44. doi: 10.1016/j.ijpara.2016.05.006. Epub 2016 Jun 29.
2
Discovery of a tyrosine-rich sporocyst wall protein in Eimeria tenella.柔嫩艾美耳球虫中富含酪氨酸的子孢子囊壁蛋白的发现。
Parasit Vectors. 2016 Mar 2;9:124. doi: 10.1186/s13071-016-1410-z.
3
Two COWP-like cysteine rich proteins from Eimeria nieschulzi (coccidia, apicomplexa) are expressed during sporulation and involved in the sporocyst wall formation.
基于单分子实时测序的不同发育阶段柔嫩艾美耳球虫全长转录组分析与转录结构鉴定。
Parasit Vectors. 2021 Sep 27;14(1):502. doi: 10.1186/s13071-021-05015-7.
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Exploring Genomes to Understand Population Biology: Recent Progress and Future Opportunities.探索基因组以了解群体生物学:最新进展与未来机遇。
Genes (Basel). 2020 Sep 21;11(9):1103. doi: 10.3390/genes11091103.
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