Gibtan Ashagrie, Song Hye Seon, Kim Joon Yong, Kim Yeon Bee, Park Nakyeong, Park Kyounghee, Lee Sang-Jae, Kwon Joseph, Roh Seong Woon, Lee Han-Seung
Department of Food Biotechnology, College of Medical and Life Sciences, Silla University, Busan 46958, Republic of Korea.
Department of Biotechnology, College of Biological and Chemical Engineering, Addis Ababa Science and Technology University, Addis Ababa 16417, Ethiopia.
Int J Syst Evol Microbiol. 2018 Jan;68(1):416-422. doi: 10.1099/ijsem.0.002525. Epub 2017 Dec 11.
A novel extremely halophilic archaeon, designated SAH-A6, was isolated from a sample of commercial rock salt in Ethiopia. Cells of SAH-A6 were aerobic and pleomorphic. The strain was able to grow at concentrations of 15-30 % (w/v) NaCl (optimum 20-25 % NaCl), at pH 6.0-9.0 (optimum pH 7.0) and in a temperature range of 30-55 °C (optimum 37-45 °C). Mg was not required for growth of SAH-A6 cells. On the basis of 16S rRNA gene sequence analysis, strain SAH-A6 was closely related to Halorubrum halodurans Cb34 (99.1 %), Halorubrum rubrum YC87 (98.9 %), Halorubrum aquaticum EN-2 (98.7 %), Halorubrum cibi JCM 15757 (98.4 %), Halorubrum luteum CGSA15 (97.3 %), Halorubrum lipolyticum 9-3 (97.1 %), Halorubrum tibetense 8W8 (97.1 %), Halorubrum kocurii JCM 1478 (97.1 %), Halorubrum halophilum B8 (97.0 %) and Halorubrum persicum C49 (97.0 %). Phylogenetic analysis based on the rpoB' gene sequences showed that strain SAH-A6 was closely related to Hrr. halodurans Cb34 (99.7 %), Hrr. aquaticum JCM 14031 (99.3 %) and other members of the genus Halorubrum (<99.0 %). The DNA G+C content of the strain was 68.0 mol%. DNA-DNA hybridization between strain SAH-A6 and the most closely related members of the genus Halorubrum were below 55 %, suggesting that the new isolate constitutes a different genospecies. On the bases of chemotaxonomic, phenotypic and genotypic data, strain SAH-A6 (=KCCM 43215=JCM 31519) represents a novel species of the genus Halorubrum, for which the name Halorubrumaethiopicum sp. nov. is proposed.
从埃塞俄比亚的一份商业岩盐样品中分离出一种新型极端嗜盐古菌,命名为SAH-A6。SAH-A6的细胞为需氧型且形态多样。该菌株能够在15-30%(w/v)的NaCl浓度下生长(最适NaCl浓度为20-25%),pH值为6.0-9.0(最适pH值为7.0),温度范围为30-55°C(最适温度为37-45°C)。SAH-A6细胞生长不需要镁。基于16S rRNA基因序列分析,菌株SAH-A6与嗜盐嗜盐碱红菌Cb34(99.1%)、嗜盐嗜盐碱红菌YC87(98.9%)、嗜盐嗜盐碱红菌EN-2(98.7%)、嗜盐嗜盐碱红菌JCM 15757(98.4%)、嗜盐嗜盐碱红菌CGSA15(97.3%)、嗜盐嗜盐碱红菌9-3(97.1%)、嗜盐嗜盐碱红菌8W8(97.1%)、嗜盐嗜盐碱红菌JCM 1478(97.1%)、嗜盐嗜盐碱红菌B8(97.0%)和嗜盐嗜盐碱红菌C49(97.0%)密切相关。基于rpoB'基因序列的系统发育分析表明,菌株SAH-A6与嗜盐嗜盐碱红菌Cb34(99.7%)、嗜盐嗜盐碱红菌JCM 14031(99.3%)以及嗜盐嗜盐碱红菌属的其他成员(<99.0%)密切相关。该菌株的DNA G+C含量为68.0 mol%。菌株SAH-A6与嗜盐嗜盐碱红菌属关系最密切的成员之间的DNA-DNA杂交率低于55% , 这表明新分离株构成一个不同的基因种。基于化学分类、表型和基因型数据,菌株SAH-A6(=KCCM 43215=JCM 31519)代表嗜盐嗜盐碱红菌属的一个新物种,为此提出嗜盐嗜盐碱红菌埃塞俄比亚种新种的名称。