Department of Biology, The University of Iowa, Iowa City, IA 52242, USA.
Nucleic Acids Res. 2018 Jan 25;46(2):748-764. doi: 10.1093/nar/gkx1243.
Studies of the repair pathways associated with DNA double strand breaks (DSBs) are numerous, and provide evidence for cell-cycle specific regulation of homologous recombination (HR) by the regulation of its associated proteins. Laser microirradiation is a well-established method to examine in vitro kinetics of repair and allows for live-imaging of DSB repair from the moment of induction. Here we apply this method to whole, live organisms, introducing an effective system to analyze exogenous, microirradiation-induced breaks in the Caenorhabditis elegans germline. Through this method we observed the sequential kinetics of the recruitment of ssDNA binding proteins RPA-1 and RAD-51 in vivo. We analyze these kinetics throughout different regions of the germline, and thus throughout a range of developmental stages of mitotic and meiotic nuclei. Our analysis demonstrates a largely conserved timing of recruitment of ssDNA binding proteins to DSBs throughout the germline, with a delay of RAD-51 recruitment at mid-pachytene nuclei. Microirradiated nuclei are viable and undergo a slow kinetics of resolution. We observe RPA-1 and RAD-51 colocalization for hours post-microirradiation throughout the germline, suggesting that there are mixed RPA-1/RAD-51 filaments. Finally, through live imaging analysis we observed RAD-51 foci movement with low frequency of coalescence.
关于与 DNA 双链断裂 (DSB) 相关的修复途径的研究很多,这些研究为同源重组 (HR) 的细胞周期特异性调控提供了证据,其调控是通过其相关蛋白的调控实现的。激光微照射是一种成熟的方法,可用于体外研究修复动力学,并允许从诱导的那一刻开始对 DSB 修复进行活细胞成像。在这里,我们将这种方法应用于完整的活体生物,引入了一种有效的系统来分析秀丽隐杆线虫生殖系中外源、微照射诱导的断裂。通过这种方法,我们观察到体内 ssDNA 结合蛋白 RPA-1 和 RAD-51 的募集的连续动力学。我们在生殖系的不同区域分析这些动力学,从而分析有丝分裂和减数分裂核的一系列发育阶段。我们的分析表明,ssDNA 结合蛋白在生殖系中募集到 DSB 的时间基本一致,在中粗线期核中 RAD-51 的募集延迟。微照射的核是有活力的,并经历缓慢的分辨率动力学。我们在整个生殖系中观察到微照射后数小时内 RPA-1 和 RAD-51 的共定位,表明存在混合的 RPA-1/RAD-51 纤维。最后,通过活细胞成像分析,我们观察到 RAD-51 焦点以低频率融合的运动。