Lima Sergio M Q, Berbel-Filho Waldir M, Araújo Thais F P, Lazzarotto Henrique, Tatarenkov Andrey, Avise John C
Laboratório de Ictiologia Sistemática e Evolutiva, Departamento de Botânica e Zoologia, Centro de Biociências, Universidade Federal do Rio Grande do Norte, Natal, Brazil.
Department of Ecology and Evolutionary Biology, University of California, Irvine, Irvine, CA, United States.
Front Genet. 2017 Dec 5;8:199. doi: 10.3389/fgene.2017.00199. eCollection 2017.
Paleo-drainage connections and headwater stream-captures are two main historical processes shaping the distribution of strictly freshwater fishes. Recently, bathymetric-based methods of paleo-drainage reconstruction have opened new possibilities to investigate how these processes have shaped the genetic structure of freshwater organisms. In this context, the present study used paleo-drainage reconstructions and single-locus cluster delimitation analyses to examine genetic structure on the whole distribution of , a 'near threatened' armored catfish from the Fluminense freshwater ecoregion in Southeastern Brazil. Sequences of two mitochondrial genes (cytochrome b and cytochrome c oxidase subunit 1) were obtained from five sampling sites in four coastal drainages: Macaé (KAE), São João (SJO), Guapi-Macacu [sub-basins Guapiaçu (GAC) and Guapimirim (GMI)], and Santo Aleixo (SAL). Pronounced genetic structure was found, involving 10 haplotypes for and 6 for , with no haplotypes shared between localities. Coalescent-based delineation methods as well as distance-based methods revealed genetic clusters corresponding to each sample site. Paleo-drainage reconstructions showed two putative paleo-rivers: an eastern one connecting KAE and SJO; and a western one merging in the Guanabara Bay (GAC, GMI, and SAL). A disagreement was uncovered between the inferred past riverine connections and current population genetic structure. Although KAE and SJO belong to the same paleo-river, the latter is more closely related to specimens from the Guanabara paleo-river. This discordance between paleo-drainage connections and phylogenetic structure may indicate an ancient stream-capture event in headwaters of this region. Furthermore, all analyses showed high divergence between KAE and the other lineages, suggesting at least one cryptic species in the latter, and that the nominal species should be restricted to the Macaé river basin, its type locality. In this drainage, impacts such as the invasive species and habitat loss can be especially threatening for such species with a narrow range. Our results also suggest that freshwater fishes from headwaters in the Serra do Mar mountains might have different biogeographical patterns than those from the lowlands, indicating a complex and dynamic climatic and geomorphological history.
古排水系统连接和源头溪流袭夺是塑造严格意义上淡水鱼类分布的两个主要历史过程。最近,基于水深测量的古排水系统重建方法为研究这些过程如何塑造淡水生物的遗传结构开辟了新的可能性。在此背景下,本研究利用古排水系统重建和单基因座聚类划分分析,来研究来自巴西东南部弗卢米嫩塞淡水生态区的一种“近危”有甲鲶鱼的整个分布范围内的遗传结构。从四个沿海排水流域的五个采样点获取了两个线粒体基因(细胞色素b和细胞色素c氧化酶亚基1)的序列:马卡埃(KAE)、圣若昂(SJO)、瓜皮 - 马卡库[瓜皮阿苏(GAC)和瓜皮米林(GMI)子流域]以及圣阿莱ixo(SAL)。研究发现了明显的遗传结构,其中[某种鱼]有10个单倍型,[另一种鱼]有6个单倍型,不同地点之间没有共享的单倍型。基于溯祖的划分方法以及基于距离的方法都揭示了与每个采样点相对应的遗传簇。古排水系统重建显示出两条假定的古河流:一条东部河流连接KAE和SJO;另一条西部河流在瓜纳巴拉湾汇合(GAC、GMI和SAL)。研究发现推断的过去河流连接与当前种群遗传结构之间存在不一致。尽管KAE和SJO属于同一条古河流,但后者与来自瓜纳巴拉古河流的样本关系更密切。这种古排水系统连接与系统发育结构之间的不一致可能表明该地区源头存在古老的溪流袭夺事件。此外,所有分析都表明KAE与其他谱系之间存在高度分化,这表明后者至少存在一个隐存物种,并且该名义物种应局限于其模式产地马卡埃河流域。在这个排水流域,诸如入侵物种和栖息地丧失等影响可能对这种分布范围狭窄的物种构成特别大的威胁。我们的研究结果还表明,来自马尔山脉源头的淡水鱼类可能具有与低地淡水鱼类不同的生物地理模式,这表明其气候和地貌历史复杂且动态。