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采用单种和多种校准集和验证集的近红外光谱定量模拟双壳类动物蛋白质、脂肪和糖原组成。

Near infra-red spectroscopy quantitative modelling of bivalve protein, lipid and glycogen composition using single-species versus multi-species calibration and validation sets.

机构信息

Ecochemistry Laboratory, Institute for Applied Ecology, University of Canberra, Bruce, ACT, Australia.

Ecochemistry Laboratory, Institute for Applied Ecology, University of Canberra, Bruce, ACT, Australia.

出版信息

Spectrochim Acta A Mol Biomol Spectrosc. 2018 Mar 15;193:537-557. doi: 10.1016/j.saa.2017.12.046. Epub 2017 Dec 18.

Abstract

Near infrared spectroscopy (NIRS) quantitative modelling was used to measure the protein, lipid and glycogen composition of five marine bivalve species (Saccostrea glomerata, Ostrea angasi, Crassostrea gigas, Mytilus galloprovincialis and Anadara trapezia) from multiple locations and seasons. Predictive models were produced for each component using individual species and aggregated sample populations for the three oyster species (S. glomerata, O. angasi and C. gigas) and for all five bivalve species. Whole animal tissues were freeze dried, ground to >20μm and scanned by NIRS. Protein, lipid and glycogen composition were determined by traditional chemical analyses and calibration models developed to allow rapid NIRS-measurement of these components in the five bivalve species. Calibration modelling was performed using wavelet selection, genetic algorithms and partial least squares analysis. Model quality was assessed using RPIQ and RMESP. For protein composition, single species model results had RPIQ values between 2.4 and 3.5 and RMSEP between 8.6 and 18%, the three oyster model had an RPIQ of 2.6 and an RMSEP of 10.8% and the five bivalve species had an RPIQ of 3.6 and RMSEP of 8.7% respectively. For lipid composition, single species models achieved RPIQ values between 2.9 and 5.3 with RMSEP between 9.1 and 11.2%, the oyster model had an RPIQ of 3.6 and RMSEP of 6.8 and the five bivalve model had an RPIQ of 5.2 and RMSEP of 6.8% respectively. For glycogen composition, the single species models had RPIQs between 3.8 and 18.9 with RMSEP between 3.5 and 9.2%, the oyster model had an RPIQ of 5.5 and RMSEP of 7.1% and the five bivalve model had an RPIQ of 4 and RMSEP of 7.6% respectively. Comparison between individual species models and aggregated models for three oyster species and five bivalve species for each component indicate that aggregating data from like species produces high quality models with robust and reliable quantitative application. The benefit of aggregated multi-species models include a greater range of bivalve composition, greater application to different bivalve species and reduced need to extensively sample individual species, that is required for obtain robust single species NIRS models.

摘要

近红外光谱(NIRS)定量建模用于测量来自多个地点和季节的五种海洋双壳类物种(Saccostrea glomerata、Ostrea angasi、Crassostrea gigas、Mytilus galloprovincialis 和 Anadara trapezia)的蛋白质、脂质和糖原组成。使用个体物种和三种牡蛎物种(S. glomerata、O. angasi 和 C. gigas)以及所有五种双壳类物种的聚合样本群体为每个成分生成了预测模型。将整个动物组织冷冻干燥、研磨至 >20μm 并用 NIRS 扫描。通过传统化学分析和开发的校准模型来确定蛋白质、脂质和糖原组成,以允许在这五种双壳类物种中快速进行 NIRS 测量。使用小波选择、遗传算法和偏最小二乘分析进行校准建模。使用 RPIQ 和 RMSEP 评估模型质量。对于蛋白质组成,单种模型的 RPIQ 值在 2.4 到 3.5 之间,RMSEP 在 8.6 到 18%之间,三种牡蛎模型的 RPIQ 值为 2.6,RMSEP 值为 10.8%,五种双壳类物种的 RPIQ 值为 3.6,RMSEP 值为 8.7%。对于脂质组成,单种模型的 RPIQ 值在 2.9 到 5.3 之间,RMSEP 在 9.1 到 11.2%之间,牡蛎模型的 RPIQ 值为 3.6,RMSEP 值为 6.8%,五种双壳类物种的 RPIQ 值为 5.2,RMSEP 值为 6.8%。对于糖原组成,单种模型的 RPIQ 值在 3.8 到 18.9 之间,RMSEP 值在 3.5 到 9.2%之间,牡蛎模型的 RPIQ 值为 5.5,RMSEP 值为 7.1%,五种双壳类物种的 RPIQ 值为 4,RMSEP 值为 7.6%。对于每个成分的三种牡蛎物种和五种双壳类物种的个体物种模型和聚合模型之间的比较表明,从相似物种中聚合数据可产生具有稳健可靠定量应用的高质量模型。聚合多物种模型的优势包括更广泛的双壳类组成、更广泛的应用于不同的双壳类物种以及减少对单个物种进行广泛采样的需求,这对于获得稳健的单物种 NIRS 模型是必需的。

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