• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

热嗜 Pf2001 酯酶温度依赖性激活的结构机制。

Structural Mechanism for the Temperature-Dependent Activation of the Hyperthermophilic Pf2001 Esterase.

机构信息

Institut de Biotecnologia i de Biomedicina and Departamento de Bioquimica i Biologia Molecular, Universitat Autonoma de Barcelona, 08193 Bellaterra, Spain; Instituto de Bioquímica Médica Leopoldo de Meis, Programa de Biologia Estrutural, Universidade Federal do Rio de Janeiro, 21941-902 Rio de Janeiro, RJ, Brazil.

Instituto de Química, Programa de Pós-Graduação em Bioquímica, Universidade Federal do Rio de Janeiro, 21941-909 Rio de Janeiro, Brazil.

出版信息

Structure. 2018 Feb 6;26(2):199-208.e3. doi: 10.1016/j.str.2017.12.004. Epub 2018 Jan 4.

DOI:10.1016/j.str.2017.12.004
PMID:29307486
Abstract

Lipases and esterases constitute a group of enzymes that catalyze the hydrolysis or synthesis of ester bonds. A major biotechnological interest corresponds to thermophilic esterases, due to their intrinsic stability at high temperatures. The Pf2001 esterase from Pyrococcus furiosus reaches its optimal activity between 70°C and 80°C. The crystal structure of the Pf2001 esterase shows two different conformations: monomer and dimer. The structures reveal important rearrangements in the "cap" subdomain between monomer and dimer, by the formation of an extensive intertwined helical interface. Moreover, the dimer interface is essential for the formation of the hydrophobic channel for substrate selectivity, as confirmed by mutagenesis and kinetic analysis. We also provide evidence for dimer formation at high temperatures, a process that correlates with its enzymatic activation. Thus, we propose a temperature-dependent activation mechanism of the Pf2001 esterase via dimerization that is necessary for the substrate channel formation in the active-site cleft.

摘要

脂肪酶和酯酶构成了一组能够催化酯键水解或合成的酶。嗜热酯酶由于其在高温下的固有稳定性,具有重要的生物技术应用价值。来自 Pyrococcus furiosus 的 Pf2001 酯酶在 70°C 到 80°C 之间达到最佳活性。Pf2001 酯酶的晶体结构显示出两种不同的构象:单体和二聚体。结构揭示了单体和二聚体之间“帽”亚结构域的重要重排,形成了广泛的交错螺旋界面。此外,二聚体界面对于底物选择性的疏水通道的形成是必不可少的,这一点通过突变和动力学分析得到了证实。我们还提供了在高温下形成二聚体的证据,这与酶的激活过程相关。因此,我们提出了 Pf2001 酯酶通过二聚化的温度依赖性激活机制,这对于活性位点裂缝中底物通道的形成是必要的。

相似文献

1
Structural Mechanism for the Temperature-Dependent Activation of the Hyperthermophilic Pf2001 Esterase.热嗜 Pf2001 酯酶温度依赖性激活的结构机制。
Structure. 2018 Feb 6;26(2):199-208.e3. doi: 10.1016/j.str.2017.12.004. Epub 2018 Jan 4.
2
Dissecting the Effect of Temperature on Hyperthermophilic Pf2001 Esterase Dimerization by Molecular Dynamics.通过分子动力学剖析温度对嗜热脂肪芽孢杆菌Pf2001酯酶二聚化的影响
J Chem Inf Model. 2023 Aug 14;63(15):4762-4771. doi: 10.1021/acs.jcim.3c00415. Epub 2023 Jul 15.
3
Characterization and Low-Resolution Structure of an Extremely Thermostable Esterase of Potential Biotechnological Interest from Pyrococcus furiosus.来自激烈热球菌的具有潜在生物技术应用价值的超嗜热酯酶的特性及低分辨率结构
Mol Biotechnol. 2016 Nov;58(11):757-766. doi: 10.1007/s12033-016-9975-5.
4
Crystal structure of hyperthermophilic esterase EstE1 and the relationship between its dimerization and thermostability properties.嗜热酯酶EstE1的晶体结构及其二聚化与热稳定性之间的关系。
BMC Struct Biol. 2007 Jul 12;7:47. doi: 10.1186/1472-6807-7-47.
5
Molecular cloning of extremely thermostable esterase gene from hyperthermophilic archaeon Pyrococcus furiosus in Escherichia coli.嗜热古菌激烈火球菌超嗜热酯酶基因在大肠杆菌中的分子克隆
Biotechnol Bioeng. 1998 Mar 5;57(5):624-9. doi: 10.1002/(sici)1097-0290(19980305)57:5<624::aid-bit15>3.0.co;2-b.
6
The crystal structure of an EST2 mutant unveils structural insights on the H group of the carboxylesterase/lipase family.一种EST2突变体的晶体结构揭示了羧酸酯酶/脂肪酶家族H组的结构见解。
J Mol Biol. 2004 Oct 8;343(1):137-46. doi: 10.1016/j.jmb.2004.08.014.
7
S-adenosylhomocysteine hydrolase from the archaeon Pyrococcus furiosus: biochemical characterization and analysis of protein structure by comparative molecular modeling.嗜热栖热菌来源的S-腺苷高半胱氨酸水解酶:生物化学特性及通过比较分子建模对蛋白质结构的分析
Proteins. 2005 Mar 1;58(4):815-25. doi: 10.1002/prot.20381.
8
C-Terminal β8-α9 Interaction Modulates Thermal Stability and Enzymatic Activity Differently in Hyperthermophilic Esterase EstE1 and Mesophilic Esterase rPPE.C 端β8-α9 相互作用在嗜热酯酶 EstE1 和嗜温酯酶 rPPE 中以不同的方式调节热稳定性和酶活性。
Appl Environ Microbiol. 2023 Jun 28;89(6):e0066223. doi: 10.1128/aem.00662-23. Epub 2023 Jun 8.
9
Crystal structure of a hyperthermophilic archaeal acylphosphatase from Pyrococcus horikoshii--structural insights into enzymatic catalysis, thermostability, and dimerization.来自嗜热栖热菌的嗜热古菌酰基磷酸酶的晶体结构——对酶催化、热稳定性和二聚化的结构见解
Biochemistry. 2005 Mar 29;44(12):4601-11. doi: 10.1021/bi047832k.
10
Expression, purification, refolding and characterization of a putative lysophospholipase from Pyrococcus furiosus: retention of structure and lipase/esterase activity in the presence of water-miscible organic solvents at high temperatures.嗜热栖热菌中一种假定的溶血磷脂酶的表达、纯化、复性及特性研究:在高温下与水混溶的有机溶剂存在时结构及脂肪酶/酯酶活性的保留
Protein Expr Purif. 2008 Jun;59(2):327-33. doi: 10.1016/j.pep.2008.02.019. Epub 2008 Mar 18.

引用本文的文献

1
Crystal structures of herbicide-detoxifying esterase reveal a lid loop affecting substrate binding and activity.除草剂解毒酯酶的晶体结构揭示了一个影响底物结合和活性的盖子环。
Nat Commun. 2023 Jul 19;14(1):4343. doi: 10.1038/s41467-023-40103-5.
2
Using Intrinsic Fluorescence to Measure Protein Stability Upon Thermal and Chemical Denaturation.利用内源荧光测量热变性和化学变性过程中蛋白质的稳定性。
Methods Mol Biol. 2023;2581:229-241. doi: 10.1007/978-1-0716-2784-6_16.
3
Toward the Complete Functional Characterization of a Minimal Bacterial Proteome.
朝向最小细菌蛋白质组的完全功能特征描述。
J Phys Chem B. 2022 Sep 15;126(36):6820-6834. doi: 10.1021/acs.jpcb.2c04188. Epub 2022 Sep 1.
4
Discovery of a New Microbial Origin Cold-Active Neopullulanase Capable for Effective Conversion of Pullulan to Panose.发现一种新型微生物来源的低温嗜冷普鲁兰酶,能够有效将普鲁兰转化为潘糖。
Int J Mol Sci. 2022 Jun 22;23(13):6928. doi: 10.3390/ijms23136928.
5
Structure and Dynamics of an Archeal Monoglyceride Lipase from as Revealed by Crystallography and In Silico Analysis.结晶学和计算机分析揭示古菌单甘油脂酶的结构与动态。
Biomolecules. 2021 Apr 3;11(4):533. doi: 10.3390/biom11040533.
6
Accelerated CO₂ Hydration with Thermostable Carbonic Anhydrase-Chitin Binding Domain Fusion Protein Immobilised on Chitin Support.固定在几丁质载体上的热稳定碳酸酐酶-几丁质结合域融合蛋白加速 CO₂水合作用。
Int J Mol Sci. 2019 Mar 25;20(6):1494. doi: 10.3390/ijms20061494.
7
Contribution of the Oligomeric State to the Thermostability of Isoenzyme 3 from .寡聚状态对来自……的同工酶3热稳定性的贡献。
Microorganisms. 2018 Oct 19;6(4):108. doi: 10.3390/microorganisms6040108.