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共转录选择性剪接失调是 CHARGE 综合征的基础。

Dysregulation of cotranscriptional alternative splicing underlies CHARGE syndrome.

机构信息

Molecular Genetics of Development Laboratory, Department of Biological Sciences, University of Quebec at Montreal, Montreal, QC H2X 3Y7, Canada.

BioMed Research Center, University of Quebec at Montreal, Montreal, QC H2X 3Y7, Canada.

出版信息

Proc Natl Acad Sci U S A. 2018 Jan 23;115(4):E620-E629. doi: 10.1073/pnas.1715378115. Epub 2018 Jan 8.

DOI:10.1073/pnas.1715378115
PMID:29311329
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5789929/
Abstract

CHARGE syndrome-which stands for coloboma of the eye, heart defects, atresia of choanae, retardation of growth/development, genital abnormalities, and ear anomalies-is a severe developmental disorder with wide phenotypic variability, caused mainly by mutations in (chromodomain helicase DNA-binding protein 7), known to encode a chromatin remodeler. The genetic lesions responsible for mutation-negative cases are unknown, at least in part because the pathogenic mechanisms underlying CHARGE syndrome remain poorly defined. Here, we report the characterization of a mouse model for mutation-negative cases of CHARGE syndrome generated by insertional mutagenesis of (family with sequence similarity 172, member A). We show that Fam172a plays a key role in the regulation of cotranscriptional alternative splicing, notably by interacting with Ago2 (Argonaute-2) and Chd7. Validation studies in a human cohort allow us to propose that dysregulation of cotranscriptional alternative splicing is a unifying pathogenic mechanism for both mutation-positive and mutation-negative cases. We also present evidence that such splicing defects can be corrected in vitro by acute rapamycin treatment.

摘要

CHARGE 综合征——代表眼缺陷、心脏缺陷、鼻后孔闭锁、生长/发育迟缓、生殖器官异常和耳部畸形——是一种严重的发育障碍,具有广泛的表型变异性,主要由 (染色质解旋酶 DNA 结合蛋白 7)突变引起,已知该基因编码一种染色质重塑因子。负责 突变阴性病例的遗传病变尚不清楚,至少部分原因是 CHARGE 综合征的致病机制仍未明确。在这里,我们通过插入诱变 (家族与序列相似性 172,成员 A)报告了一种用于 突变阴性 CHARGE 综合征的小鼠模型的特征。我们表明 Fam172a 在共转录性可变剪接的调控中起着关键作用,特别是通过与 Ago2(Argonaute-2)和 Chd7 相互作用。在人类队列中的验证研究使我们能够提出共转录性可变剪接的失调是 突变阳性和 突变阴性病例的统一致病机制。我们还提供了证据表明,这种剪接缺陷可以通过急性雷帕霉素治疗在体外得到纠正。

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本文引用的文献

1
Chd7 is indispensable for mammalian brain development through activation of a neuronal differentiation programme.Chd7 通过激活神经元分化程序对哺乳动物大脑发育是必不可少的。
Nat Commun. 2017 Mar 20;8:14758. doi: 10.1038/ncomms14758.
2
A Broad Set of Chromatin Factors Influences Splicing.一系列广泛的染色质因子影响剪接。
PLoS Genet. 2016 Sep 23;12(9):e1006318. doi: 10.1371/journal.pgen.1006318. eCollection 2016 Sep.
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SPOP-containing complex regulates SETD2 stability and H3K36me3-coupled alternative splicing.含SPOP的复合物调节SETD2稳定性和H3K36me3偶联的可变剪接。
Nucleic Acids Res. 2017 Jan 9;45(1):92-105. doi: 10.1093/nar/gkw814. Epub 2016 Sep 9.
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Upregulation of the Nr2f1-A830082K12Rik gene pair in murine neural crest cells results in a complex phenotype reminiscent of Waardenburg syndrome type 4.小鼠神经嵴细胞中Nr2f1-A830082K12Rik基因对的上调导致了一种复杂的表型,使人联想到4型瓦登伯格综合征。
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5
CHD7, Oct3/4, Sox2, and Nanog control FoxD3 expression during mouse neural crest-derived stem cell formation.在小鼠神经嵴衍生干细胞形成过程中,CHD7、Oct3/4、Sox2和Nanog控制FoxD3的表达。
FEBS J. 2016 Oct;283(20):3791-3806. doi: 10.1111/febs.13843. Epub 2016 Sep 19.
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Involvement of PARP1 in the regulation of alternative splicing.聚(ADP-核糖)聚合酶1(PARP1)参与可变剪接的调控。
Cell Discov. 2016 Feb 16;2:15046. doi: 10.1038/celldisc.2015.46. eCollection 2016.
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Rescue of neural crest-derived phenotypes in a zebrafish CHARGE model by Sox10 downregulation.通过下调Sox10挽救斑马鱼CHARGE模型中神经嵴衍生的表型。
Hum Mol Genet. 2016 Aug 15;25(16):3539-3554. doi: 10.1093/hmg/ddw198. Epub 2016 Jul 13.
8
Pigmentation-based insertional mutagenesis is a simple and potent screening approach for identifying neurocristopathy-associated genes in mice.基于色素沉着的插入诱变是一种用于在小鼠中鉴定神经嵴病相关基因的简单而有效的筛选方法。
Rare Dis. 2016 Mar 3;4(1):e1156287. doi: 10.1080/21675511.2016.1156287. eCollection 2016.
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Response to correspondence to Hale et al. atypical phenotypes associated with pathogenic CHD7 variants and a proposal for broadening CHARGE syndrome clinical diagnostic criteria.对 Hale 等人来信的回复:与致病性 CHD7 变体相关的非典型表型以及扩大 CHARGE 综合征临床诊断标准的提议。
Am J Med Genet A. 2016 Dec;170(12):3367-3368. doi: 10.1002/ajmg.a.37629. Epub 2016 Mar 21.
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A direct role for murine Cdx proteins in the trunk neural crest gene regulatory network.小鼠Cdx蛋白在躯干神经嵴基因调控网络中的直接作用。
Development. 2016 Apr 15;143(8):1363-74. doi: 10.1242/dev.132159. Epub 2016 Mar 7.